RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ANP32CO43423 234 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 HIBADHP31937 336 aaKnown RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 IREB2P48200 963 aaKnown RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 TAF7LQ5H9L4 462 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 ANKRD13AQ8IZ07 590 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 MRIQ9BWK5 157 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 PUS3Q9BZE2 481 aaKnown RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 C9orf78Q9NZ63 289 aaPredicted RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
PALB2-202ENST00000561514 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
PALB2-202ENST00000561514 GYG1P46976 350 aa10.6□□□□□ -0.71
PALB2-202ENST00000561514 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.6□□□□□ -0.71
PALB2-202ENST00000561514 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
PALB2-202ENST00000561514 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
PALB2-202ENST00000561514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.6□□□□□ -0.71
PALB2-202ENST00000561514 PTPN18Q99952 460 aa10.6□□□□□ -0.71
PALB2-202ENST00000561514 BICC1Q9H694 974 aaKnown RBP10.6□□□□□ -0.71
PALB2-202ENST00000561514 VEZTQ9HBM0 779 aa10.6□□□□□ -0.71
PALB2-202ENST00000561514 TTF2Q9UNY4 1162 aaKnown RBP10.6□□□□□ -0.71
PALB2-202ENST00000561514 JAG2Q9Y219 1238 aa10.6□□□□□ -0.71
PALB2-202ENST00000561514 RPAP1Q9BWH6 1393 aaPredicted RBP10.6□□□□□ -0.71
PALB2-202ENST00000561514 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 FGFR2P21802 821 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 CRKP46108 304 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 CRHR2Q13324 411 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 GRIK5Q16478 980 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 FKBP1CQ5VVH2 108 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
PALB2-202ENST00000561514 TBC1D22AQ8WUA7 517 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 ARMC5Q96C12 935 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
PALB2-202ENST00000561514 PTPRCP08575 1304 aa10.58□□□□□ -0.71
PALB2-202ENST00000561514 ECM29Q5VYK3 1845 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 PLIN1O60240 522 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 EIF5BO60841 1220 aaKnown RBP10.58□□□□□ -0.72
PALB2-202ENST00000561514 CAP1Q01518 475 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 INTS3Q68E01 1043 aaKnown RBP10.58□□□□□ -0.72
PALB2-202ENST00000561514 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 SLC4A10Q6U841 1118 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 ERO1AQ96HE7 468 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 ZDHHC15Q96MV8 337 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 TDRD3Q9H7E2 651 aaKnown RBP10.58□□□□□ -0.72
PALB2-202ENST00000561514 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
PALB2-202ENST00000561514 TRIM17Q9Y577 477 aa10.58□□□□□ -0.72
PALB2-202ENST00000561514 SPDYE5A6NIY4 337 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 PDE8BO95263 885 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 RBM5P52756 815 aaKnown RBP eCLIP10.57□□□□□ -0.72
PALB2-202ENST00000561514 VGLL4Q14135 290 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 LRRC24Q50LG9 513 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 APOBEC3HQ6NTF7 200 aaKnown RBP10.57□□□□□ -0.72
PALB2-202ENST00000561514 FAM83AQ86UY5 434 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 BRI3BPQ8WY22 251 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 TMEM39BQ9GZU3 492 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 ZCCHC17Q9NP64 241 aaKnown RBP10.57□□□□□ -0.72
PALB2-202ENST00000561514 PTPN22Q9Y2R2 807 aa10.57□□□□□ -0.72
PALB2-202ENST00000561514 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
PALB2-202ENST00000561514 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
PALB2-202ENST00000561514 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
PALB2-202ENST00000561514 TNNI2P48788 182 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 GTF2A2P52657 109 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 SP3Q02447 781 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 TEKT1Q969V4 418 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 USP44Q9H0E7 712 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 ELP3Q9H9T3 547 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 MAST3O60307 1309 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 OTOFQ9HC10 1997 aa10.56□□□□□ -0.72
PALB2-202ENST00000561514 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
PALB2-202ENST00000561514 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 E9PSI1 815 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 PUM3Q15397 648 aaKnown RBP10.55□□□□□ -0.72
PALB2-202ENST00000561514 CAVIN4Q5BKX8 364 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 METTL24Q5JXM2 366 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 CD99L2Q8TCZ2 262 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 UBE2Q2Q8WVN8 375 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 SSH1Q8WYL5 1049 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 EFCC1Q9HA90 598 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
PALB2-202ENST00000561514 BRCA2P51587 3418 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 CCL15-CCL14A0A0B4J2E2 113 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 EYA2O00167 538 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 BCAMP50895 628 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
PALB2-202ENST00000561514 CCL15Q16663 113 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 ERO1BQ86YB8 467 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 HOOK2Q96ED9 719 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 ZNF333Q96JL9 665 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
PALB2-202ENST00000561514 IFIT1P09914 478 aaKnown RBP10.53□□□□□ -0.72
PALB2-202ENST00000561514 SLFN5Q08AF3 891 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms