RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 TNFAIP1Q13829 316 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 SPDYE2Q495Y8 402 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 IFFO2Q5TF58 517 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 ARMC9Q7Z3E5 817 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 TEKT1Q969V4 418 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 ZNF70Q9UC06 446 aaPredicted RBP24.8■■□□□ 1.56
IPO4-215ENST00000560935 AOX1Q06278 1338 aa24.8■■□□□ 1.56
IPO4-215ENST00000560935 UBE2Q2LH0YL09 131 aa24.79■■□□□ 1.56
IPO4-215ENST00000560935 SEMA3EO15041 775 aa24.79■■□□□ 1.56
IPO4-215ENST00000560935 CA12O43570 354 aa24.79■■□□□ 1.56
IPO4-215ENST00000560935 LBX1P52954 281 aa24.79■■□□□ 1.56
IPO4-215ENST00000560935 TFCP2Q12800 502 aa24.79■■□□□ 1.56
IPO4-215ENST00000560935 TDRD3Q9H7E2 651 aaKnown RBP24.79■■□□□ 1.56
IPO4-215ENST00000560935 MS4A1P11836 297 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 PHKA1P46020 1223 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 G3BP1Q13283 466 aaKnown RBP eCLIP24.78■■□□□ 1.563e-7■■□□□ 11.6
IPO4-215ENST00000560935 RASAL3Q86YV0 1011 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 TNS4Q8IZW8 715 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 ZIC5Q96T25 663 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 MRIQ9BWK5 157 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 DENND2AQ9ULE3 1009 aa24.78■■□□□ 1.56
IPO4-215ENST00000560935 A0A1B0GUL7 405 aa24.77■■□□□ 1.56
IPO4-215ENST00000560935 ADORA1P30542 326 aa24.77■■□□□ 1.56
IPO4-215ENST00000560935 KIF23Q02241 960 aaPredicted RBP24.77■■□□□ 1.56
IPO4-215ENST00000560935 PRKG1Q13976 671 aa24.77■■□□□ 1.56
IPO4-215ENST00000560935 SUPT20HL1Q3ZLR7 823 aa24.77■■□□□ 1.56
IPO4-215ENST00000560935 C1orf115Q9H7X2 142 aa24.77■■□□□ 1.56
IPO4-215ENST00000560935 ZBTB7BO15156 539 aaPredicted RBP24.76■■□□□ 1.55
IPO4-215ENST00000560935 TIMM10P62072 90 aa24.76■■□□□ 1.55
IPO4-215ENST00000560935 RASA3Q14644 834 aa24.76■■□□□ 1.55
IPO4-215ENST00000560935 CCDC102BQ68D86 513 aa24.76■■□□□ 1.55
IPO4-215ENST00000560935 ZBTB22O15209 634 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 PPP1R12BO60237 982 aaPredicted RBP24.75■■□□□ 1.55
IPO4-215ENST00000560935 TNNI2P48788 182 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 ATP8B2P98198 1209 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 POLA2Q14181 598 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 MVPQ14764 893 aaKnown RBP24.75■■□□□ 1.55
IPO4-215ENST00000560935 PANK1Q8TE04 598 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 ZDHHC15Q96MV8 337 aa24.75■■□□□ 1.55
IPO4-215ENST00000560935 ANGEL1Q9UNK9 670 aaKnown RBP24.75■■□□□ 1.55
IPO4-215ENST00000560935 HHIPL2Q6UWX4 724 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 SSH3Q8TE77 659 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 XAGE2Q96GT9 111 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 NEUROD6Q96NK8 337 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 TMOD2Q9NZR1 351 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 SALL1Q9NSC2 1324 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 SSC5DA1L4H1 1573 aa24.74■■□□□ 1.55
IPO4-215ENST00000560935 NBPF12Q5TAG4 269 aaPredicted RBP24.73■■□□□ 1.55
IPO4-215ENST00000560935 REM2Q8IYK8 340 aaPredicted RBP24.73■■□□□ 1.55
IPO4-215ENST00000560935 ZGPATQ8N5A5 531 aaKnown RBP24.73■■□□□ 1.55
IPO4-215ENST00000560935 RCAN3Q9UKA8 241 aa24.73■■□□□ 1.55
IPO4-215ENST00000560935 TCP10L2B9ZVM9 353 aa24.72■■□□□ 1.55
IPO4-215ENST00000560935 LDHBP07195 334 aaKnown RBP24.72■■□□□ 1.55
IPO4-215ENST00000560935 OS9Q13438 667 aaPredicted RBP24.72■■□□□ 1.55
IPO4-215ENST00000560935 TSKSQ9UJT2 592 aa24.72■■□□□ 1.55
IPO4-215ENST00000560935 AKAP11Q9UKA4 1901 aa24.72■■□□□ 1.55
IPO4-215ENST00000560935 PDS5AQ29RF7 1337 aaKnown RBP24.71■■□□□ 1.55
IPO4-215ENST00000560935 PRDX5P30044 214 aa24.71■■□□□ 1.55
IPO4-215ENST00000560935 MAP3K11Q16584 847 aa24.71■■□□□ 1.55
IPO4-215ENST00000560935 LDLRAD1Q5T700 205 aa24.71■■□□□ 1.55
IPO4-215ENST00000560935 GORABQ5T7V8 394 aa24.71■■□□□ 1.55
IPO4-215ENST00000560935 FZD1Q9UP38 647 aa24.71■■□□□ 1.55
IPO4-215ENST00000560935 RASGRF1Q13972 1273 aa24.7■■□□□ 1.54
IPO4-215ENST00000560935 APOBEC3HQ6NTF7 200 aaKnown RBP24.7■■□□□ 1.54
IPO4-215ENST00000560935 CSRNP1Q96S65 589 aa24.7■■□□□ 1.54
IPO4-215ENST00000560935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.7■■□□□ 1.54
IPO4-215ENST00000560935 SURF6O75683 361 aaKnown RBP24.69■■□□□ 1.54
IPO4-215ENST00000560935 IREB2P48200 963 aaKnown RBP24.69■■□□□ 1.54
IPO4-215ENST00000560935 SAGE1Q9NXZ1 904 aa24.69■■□□□ 1.54
IPO4-215ENST00000560935 UNCXA6NJT0 531 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 CACNB3P54284 484 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 DIXDC1Q155Q3 683 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 FKBP1CQ5VVH2 108 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 TMEM39BQ9GZU3 492 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 GPR108Q9NPR9 543 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 DAGLAQ9Y4D2 1042 aa24.68■■□□□ 1.54
IPO4-215ENST00000560935 CEP85Q6P2H3 762 aa24.67■■□□□ 1.54
IPO4-215ENST00000560935 SLC10A4Q96EP9 437 aa24.67■■□□□ 1.54
IPO4-215ENST00000560935 TEPSINQ96N21 525 aa24.67■■□□□ 1.54
IPO4-215ENST00000560935 ABCF2Q9UG63 623 aa24.67■■□□□ 1.54
IPO4-215ENST00000560935 SPTY2D1Q68D10 685 aaPredicted RBP24.66■■□□□ 1.54
IPO4-215ENST00000560935 FAM83AQ86UY5 434 aa24.66■■□□□ 1.54
IPO4-215ENST00000560935 DDX19BQ9UMR2 479 aa24.66■■□□□ 1.54
IPO4-215ENST00000560935 NOP58Q9Y2X3 529 aaKnown RBP24.66■■□□□ 1.54
IPO4-215ENST00000560935 USP2O75604 605 aaPredicted RBP24.65■■□□□ 1.54
IPO4-215ENST00000560935 MKRN3Q13064 507 aaKnown RBP24.65■■□□□ 1.54
IPO4-215ENST00000560935 TNNI3KQ59H18 835 aa24.65■■□□□ 1.54
IPO4-215ENST00000560935 DZIP1Q86YF9 867 aaKnown RBP24.65■■□□□ 1.54
IPO4-215ENST00000560935 RNF186Q9NXI6 227 aa24.65■■□□□ 1.54
IPO4-215ENST00000560935 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.65■■□□□ 1.54
IPO4-215ENST00000560935 FPGT-TNNI3KV9GXZ4 949 aa24.65■■□□□ 1.54
IPO4-215ENST00000560935 MYH2Q9UKX2 1941 aa24.65■■□□□ 1.54
IPO4-215ENST00000560935 TRPA1O75762 1119 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 UQCRFS1P1P0C7P4 283 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 ARID4AP29374 1257 aaPredicted RBP24.64■■□□□ 1.54
IPO4-215ENST00000560935 SPRYD7Q5W111 196 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 CDAN1Q8IWY9 1227 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 SLF2Q8IX21 1173 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 ANKRD13AQ8IZ07 590 aa24.64■■□□□ 1.54
IPO4-215ENST00000560935 COG6Q9Y2V7 657 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms