RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 R3HDMLQ9H3Y0 253 aa14.01□□□□□ -0.17
GABPB1-210ENST00000560825 BRCA2P51587 3418 aa14.01□□□□□ -0.17
GABPB1-210ENST00000560825 MYH2Q9UKX2 1941 aa14□□□□□ -0.17
GABPB1-210ENST00000560825 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
GABPB1-210ENST00000560825 ADORA1P30542 326 aa14□□□□□ -0.17
GABPB1-210ENST00000560825 HNRNPUQ00839 825 aaKnown RBP eCLIP14□□□□□ -0.17
GABPB1-210ENST00000560825 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
GABPB1-210ENST00000560825 INTS3Q68E01 1043 aaKnown RBP14□□□□□ -0.17
GABPB1-210ENST00000560825 ABHD8Q96I13 439 aa14□□□□□ -0.17
GABPB1-210ENST00000560825 TEPSINQ96N21 525 aa14□□□□□ -0.17
GABPB1-210ENST00000560825 ZNF70Q9UC06 446 aaPredicted RBP14□□□□□ -0.17
GABPB1-210ENST00000560825 ANGEL1Q9UNK9 670 aaKnown RBP14□□□□□ -0.17
GABPB1-210ENST00000560825 GJA5P36382 358 aa13.99□□□□□ -0.17
GABPB1-210ENST00000560825 CRKP46108 304 aa13.99□□□□□ -0.17
GABPB1-210ENST00000560825 FKBP1BP68106 108 aa13.99□□□□□ -0.17
GABPB1-210ENST00000560825 RASA3Q14644 834 aa13.99□□□□□ -0.17
GABPB1-210ENST00000560825 PUM3Q15397 648 aaKnown RBP13.99□□□□□ -0.17
GABPB1-210ENST00000560825 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
GABPB1-210ENST00000560825 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
GABPB1-210ENST00000560825 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-210ENST00000560825 API5Q9BZZ5 524 aaKnown RBP13.99□□□□□ -0.17
GABPB1-210ENST00000560825 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 TMEM39BQ9GZU3 492 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 ZSWIM8A7E2V4 1837 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 TCP10L2B9ZVM9 353 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 USP2O75604 605 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-210ENST00000560825 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 PHKA1P46020 1223 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 VPS37DQ86XT2 251 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
GABPB1-210ENST00000560825 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 RLBP1P12271 317 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 DIXDC1Q155Q3 683 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
GABPB1-210ENST00000560825 TMEM57Q8N5G2 664 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
GABPB1-210ENST00000560825 CA12O43570 354 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 CIAO1O76071 339 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 PRDX5P30044 214 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 MMP14P50281 582 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 TIMM10P62072 90 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 ATP2B3Q16720 1220 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 CAVIN4Q5BKX8 364 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 SPRYD7Q5W111 196 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 LPIN2Q92539 896 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 COPRSQ9NQ92 184 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 AK9Q5TCS8 1911 aa13.96□□□□□ -0.18
GABPB1-210ENST00000560825 DOCK2Q92608 1830 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
GABPB1-210ENST00000560825 TFCP2Q12800 502 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 DGKZQ13574 1117 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 C1orf115Q9H7X2 142 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 SAGE1Q9NXZ1 904 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 CDK5RAP2Q96SN8 1893 aa13.95□□□□□ -0.18
GABPB1-210ENST00000560825 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
GABPB1-210ENST00000560825 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
GABPB1-210ENST00000560825 SLURP2P0DP57 97 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 SLC5A1P13866 664 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 NF2P35240 595 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 TM4SF4P48230 202 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 CAP1Q01518 475 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 ARMC9Q7Z3E5 817 aa13.94□□□□□ -0.18
GABPB1-210ENST00000560825 MYO1BO43795 1136 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 MTX1Q13505 466 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 PI16Q6UXB8 463 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
GABPB1-210ENST00000560825 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 WNK4Q96J92 1243 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 PTPN18Q99952 460 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
GABPB1-210ENST00000560825 MKI67P46013 3256 aaKnown RBP13.92□□□□□ -0.18
GABPB1-210ENST00000560825 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 NFIAQ12857 509 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 CCDC102BQ68D86 513 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-210ENST00000560825 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 PPP2R3BQ9Y5P8 575 aa13.92□□□□□ -0.18
GABPB1-210ENST00000560825 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
GABPB1-210ENST00000560825 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-210ENST00000560825 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
GABPB1-210ENST00000560825 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
GABPB1-210ENST00000560825 SLC10A4Q96EP9 437 aa13.91□□□□□ -0.18
GABPB1-210ENST00000560825 PHIPQ8WWQ0 1821 aa13.91□□□□□ -0.18
GABPB1-210ENST00000560825 HDLBPQ00341 1268 aaKnown RBP13.9□□□□□ -0.18
GABPB1-210ENST00000560825 CDC42EP5Q6NZY7 148 aa13.9□□□□□ -0.18
GABPB1-210ENST00000560825 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
GABPB1-210ENST00000560825 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
GABPB1-210ENST00000560825 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.19
GABPB1-210ENST00000560825 GNAI3P08754 354 aa13.9□□□□□ -0.19
GABPB1-210ENST00000560825 VGLL4Q14135 290 aa13.9□□□□□ -0.19
GABPB1-210ENST00000560825 SUPT20HL1Q3ZLR7 823 aa13.9□□□□□ -0.19
GABPB1-210ENST00000560825 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms