RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
SNRPCP18-201ENST00000560619 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
SNRPCP18-201ENST00000560619 ZDHHC15Q96MV8 337 aa13.6□□□□□ -0.23
SNRPCP18-201ENST00000560619 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
SNRPCP18-201ENST00000560619 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
SNRPCP18-201ENST00000560619 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 MYO1BO43795 1136 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 TBC1D10BQ4KMP7 808 aaPredicted RBP13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 CDC37L1Q7L3B6 337 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 ECHDC1Q9NTX5 307 aa13.59□□□□□ -0.23
SNRPCP18-201ENST00000560619 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 ERC2O15083 957 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 ITGBL1O95965 494 aaPredicted RBP13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 LDHCP07864 332 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 CRKP46108 304 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 GSTO1P78417 241 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 NUCB1Q02818 461 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 SCARF1Q14162 830 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 CFAP100Q494V2 611 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 FKBP1CQ5VVH2 108 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 JAG2Q9Y219 1238 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
SNRPCP18-201ENST00000560619 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 EGFRP00533 1210 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 POTEJP0CG39 1038 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 PRDX5P30044 214 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 C1QTNF8P60827 252 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 HAUS7Q99871 368 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 ABCF2Q9UG63 623 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 GAKO14976 1311 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 PASKQ96RG2 1323 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
SNRPCP18-201ENST00000560619 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 GLRX3O76003 335 aaKnown RBP13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 ZAP70P43403 619 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 TNFAIP1Q13829 316 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 GRIK5Q16478 980 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 NBPF9Q3BBW0 867 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 NSUN4Q96CB9 384 aaKnown RBP13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 LRP2BPQ9P2M1 347 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 PPP2R3BQ9Y5P8 575 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 AOX1Q06278 1338 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 MYH2Q9UKX2 1941 aa13.56□□□□□ -0.24
SNRPCP18-201ENST00000560619 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 MX1P20591 662 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 PI16Q6UXB8 463 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 DZIP1Q86YF9 867 aaKnown RBP13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 OSBPL3Q9H4L5 887 aa13.55□□□□□ -0.24
SNRPCP18-201ENST00000560619 GPR75-ASB3A0A0A6YYF3 556 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 MECOMQ03112 1051 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 MAP1SQ66K74 1059 aaPredicted RBP13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 SNRKQ9NRH2 765 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 DAGLAQ9Y4D2 1042 aa13.54□□□□□ -0.24
SNRPCP18-201ENST00000560619 MAST2Q6P0Q8 1798 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 PLCG2P16885 1265 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 PDE1AP54750 535 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 PPP4CP60510 307 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 LRRFIP1Q32MZ4 808 aaKnown RBP13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 TBC1D9Q6ZT07 1266 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 KRT26Q7Z3Y9 468 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 FAM83AQ86UY5 434 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 PI4K2BQ8TCG2 481 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 RAI14Q9P0K7 980 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 MROH7-TTC4A0A0A0MT08 1334 aa13.53□□□□□ -0.24
SNRPCP18-201ENST00000560619 BAG3O95817 575 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 TNNI2P48788 182 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 APLP1P51693 650 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 ZNF384Q8TF68 577 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
SNRPCP18-201ENST00000560619 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms