RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 INTS3Q68E01 1043 aaKnown RBP9.96□□□□□ -0.82
LRRC28-219ENST00000560483 KLHDC4Q8TBB5 520 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 EPAS1Q99814 870 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 LEMD3Q9Y2U8 911 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 UTYO14607 1347 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 SRGAP3O43295 1099 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 GFRA3O60609 400 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 FRAT2O75474 233 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-219ENST00000560483 CXCL9Q07325 125 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 OS9Q13438 667 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-219ENST00000560483 ANKRD44Q8N8A2 993 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 PUS3Q9BZE2 481 aaKnown RBP9.95□□□□□ -0.82
LRRC28-219ENST00000560483 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
LRRC28-219ENST00000560483 SNED1Q8TER0 1413 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 MROH5Q6ZUA9 1318 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 H7C1D1 291 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 PSMD14O00487 310 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 EPHX2P34913 555 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 GMPSP49915 693 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-219ENST00000560483 NBR1Q14596 966 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
LRRC28-219ENST00000560483 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 SMC1BQ8NDV3 1235 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
LRRC28-219ENST00000560483 COL4A5P29400 1685 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 DUOX1Q9NRD9 1551 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 MED23Q9ULK4 1368 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 WTIPA6NIX2 430 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-219ENST00000560483 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 SNAP23O00161 211 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 RABL6Q3YEC7 729 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-219ENST00000560483 LRRC24Q50LG9 513 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 SAMD7Q7Z3H4 446 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 PNMA8AQ86V59 439 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-219ENST00000560483 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 TAF1DQ9H5J8 278 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-219ENST00000560483 KCNQ5Q9NR82 932 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 SCN4AP35499 1836 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
LRRC28-219ENST00000560483 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 IFIT1P09914 478 aaKnown RBP9.92□□□□□ -0.82
LRRC28-219ENST00000560483 KLRK1P26718 216 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 EPS15P42566 896 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 G3BP1Q13283 466 aaKnown RBP eCLIP9.92□□□□□ -0.82
LRRC28-219ENST00000560483 CAVIN4Q5BKX8 364 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 RBM46Q8TBY0 533 aaKnown RBP9.92□□□□□ -0.82
LRRC28-219ENST00000560483 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 MTRQ99707 1265 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 COA1Q9GZY4 146 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 CNOT7Q9UIV1 285 aaKnown RBP9.92□□□□□ -0.82
LRRC28-219ENST00000560483 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
LRRC28-219ENST00000560483 JAG2Q9Y219 1238 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
LRRC28-219ENST00000560483 EYA2O00167 538 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 RLBP1P12271 317 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 SLC5A1P13866 664 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 SCNN1DP51172 638 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 GTF2IP78347 998 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 TRAF7Q6Q0C0 670 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 TXNRD3Q86VQ6 643 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 LDHDQ86WU2 507 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
LRRC28-219ENST00000560483 GPRC5DQ9NZD1 345 aa9.91□□□□□ -0.82
LRRC28-219ENST00000560483 LTBP1Q14766 1721 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 F8W031 263 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 MAP3K7O43318 606 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 HIBADHP31937 336 aaKnown RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 GYG1P46976 350 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 PTPN12Q05209 780 aaKnown RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 CHAF1AQ13111 956 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 UBE4AQ14139 1066 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 PUM3Q15397 648 aaKnown RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 TBC1D10BQ4KMP7 808 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 GORABQ5T7V8 394 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 OGFOD1Q8N543 542 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 CD209Q9NNX6 404 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 ADARB2Q9NS39 739 aaKnown RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 IQSEC3Q9UPP2 1182 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-219ENST00000560483 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
LRRC28-219ENST00000560483 POTECB2RU33 542 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 PDE8BO95263 885 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 IL15P40933 162 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 RBM5P52756 815 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 FSTL1Q12841 308 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 ATP2B3Q16720 1220 aa9.89□□□□□ -0.83
LRRC28-219ENST00000560483 MAP1SQ66K74 1059 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-219ENST00000560483 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms