RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SHTN1A0MZ66 631 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 APBB1O00213 710 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 MCAMP43121 646 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 SCARF1Q14162 830 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 CCDC136Q96JN2 1154 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.32
PKNOX1-209ENST00000560448 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 EGFRP00533 1210 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
PKNOX1-209ENST00000560448 PASKQ96RG2 1323 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 CRKP46108 304 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 MAP1SQ66K74 1059 aaPredicted RBP17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 FAM163AQ96GL9 167 aaPredicted RBP17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 PPP2R3BQ9Y5P8 575 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
PKNOX1-209ENST00000560448 HSPA6P17066 643 aa17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 PRDX5P30044 214 aa17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 GSTO1P78417 241 aa17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 ABCF2Q9UG63 623 aa17.05■□□□□ 0.32
PKNOX1-209ENST00000560448 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 LDHCP07864 332 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 ATP5JP18859 108 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 APLP1P51693 650 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 NBPF9Q3BBW0 867 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 TMOD2Q9NZR1 351 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
PKNOX1-209ENST00000560448 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
PKNOX1-209ENST00000560448 GAKO14976 1311 aa17.02■□□□□ 0.32
PKNOX1-209ENST00000560448 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 ERC2O15083 957 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 ZAP70P43403 619 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 TNNI2P48788 182 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 GRIK5Q16478 980 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 CREBZFQ9NS37 354 aa17.02■□□□□ 0.31
PKNOX1-209ENST00000560448 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 ANKRD45Q5TZF3 282 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 APOBEC3HQ6NTF7 200 aaKnown RBP17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 NSUN4Q96CB9 384 aaKnown RBP17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 TRPM7Q96QT4 1865 aa17.01■□□□□ 0.31
PKNOX1-209ENST00000560448 TMEM88BA6NKF7 163 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
PKNOX1-209ENST00000560448 NF2P35240 595 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 MECOMQ03112 1051 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 FAM83AQ86UY5 434 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 HAUS7Q99871 368 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 GLIS2Q9BZE0 524 aaPredicted RBP17■□□□□ 0.31
PKNOX1-209ENST00000560448 DAGLAQ9Y4D2 1042 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
PKNOX1-209ENST00000560448 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 PLCG2P16885 1265 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 FKBP1BP68106 108 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 NOL10Q9BSC4 688 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 MYH2Q9UKX2 1941 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 DOCK2Q92608 1830 aa16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
PKNOX1-209ENST00000560448 GPR75-ASB3A0A0A6YYF3 556 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 BAG3O95817 575 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 IGHDP01880 384 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 MX1P20591 662 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
PKNOX1-209ENST00000560448 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 NUCB1Q02818 461 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 LRRFIP1Q32MZ4 808 aaKnown RBP16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms