RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MYO1BO43795 1136 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 ZNF157P51786 506 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 RASGRF1Q13972 1273 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 PRKG1Q13976 671 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 WDR66Q8TBY9 1149 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 NEUROD6Q96NK8 337 aa14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-216ENST00000560243 SURF6O75683 361 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 PRDX5P30044 214 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 MAP2K2P36507 400 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 CACNB3P54284 484 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 TTLL12Q14166 644 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 RASA3Q14644 834 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 CEP85Q6P2H3 762 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 CDAN1Q8IWY9 1227 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 GNL3LQ9NVN8 582 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 AKAP2Q9Y2D5 859 aa14.41□□□□□ -0.1
RABGGTA-216ENST00000560243 FKBP1BP68106 108 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 DIXDC1Q155Q3 683 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 AIDAQ96BJ3 306 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 ZDHHC15Q96MV8 337 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 DENND2AQ9ULE3 1009 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 SUGT1Q9Y2Z0 365 aa14.4□□□□□ -0.1
RABGGTA-216ENST00000560243 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 SEMA3EO15041 775 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 SLC10A3P09131 477 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 MS4A1P11836 297 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 NF2P35240 595 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 NOGQ13253 232 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 PI16Q6UXB8 463 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 RASAL3Q86YV0 1011 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 CCDC102AQ96A19 550 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 NOP58Q9Y2X3 529 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-216ENST00000560243 HSPA8P11142 646 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 LBX1P52954 281 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 TNNI3KQ59H18 835 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 MRIQ9BWK5 157 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 ANGEL1Q9UNK9 670 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 DAGLAQ9Y4D2 1042 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 PPP2R3BQ9Y5P8 575 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 FPGT-TNNI3KV9GXZ4 949 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 MAST3O60307 1309 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
RABGGTA-216ENST00000560243 ZBTB22O15209 634 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 LDHBP07195 334 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 LDLRAD1Q5T700 205 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 HHIPL2Q6UWX4 724 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 SIRT2Q8IXJ6 389 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 TEPSINQ96N21 525 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 DBNDD2Q9BQY9 259 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 HMG20BQ9P0W2 317 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 DDX19BQ9UMR2 479 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 MYH2Q9UKX2 1941 aa14.37□□□□□ -0.11
RABGGTA-216ENST00000560243 ARMC9Q7Z3E5 817 aa14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 TLR7Q9NYK1 1049 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 ABCF2Q9UG63 623 aa14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 PDS5AQ29RF7 1337 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-216ENST00000560243 USP2O75604 605 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 ARID4AP29374 1257 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 MCAMP43121 646 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 TNFAIP1Q13829 316 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 PDE3AQ14432 1141 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 SUPT20HL1Q3ZLR7 823 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 TBC1D9Q6ZT07 1266 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 SPATA5Q8NB90 893 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 ZNF384Q8TF68 577 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 CSRNP1Q96S65 589 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 AKAP11Q9UKA4 1901 aa14.35□□□□□ -0.11
RABGGTA-216ENST00000560243 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 MAP3K11Q16584 847 aa14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 CCDC8Q9H0W5 538 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 SNRKQ9NRH2 765 aa14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-216ENST00000560243 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms