RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 FZD1Q9UP38 647 aa18.33■□□□□ 0.52
RABGGTA-211ENST00000559850 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.52
RABGGTA-211ENST00000559850 MYH2Q9UKX2 1941 aa18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 HSPA1AP0DMV8 641 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 HSPA1BP0DMV9 641 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 PRDX5P30044 214 aa18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 WDR66Q8TBY9 1149 aa18.32■□□□□ 0.52
RABGGTA-211ENST00000559850 MYO1BO43795 1136 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 CACNB3P54284 484 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 GORABQ5T7V8 394 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 MYO5AQ9Y4I1 1855 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-211ENST00000559850 SSC5DA1L4H1 1573 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 TTLL12Q14166 644 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 DIXDC1Q155Q3 683 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 DBNDD2Q9BQY9 259 aa18.3■□□□□ 0.52
RABGGTA-211ENST00000559850 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 APBB1O00213 710 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 SEMA3EO15041 775 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 ECE1P42892 770 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 ZIC5Q96T25 663 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 CCDC8Q9H0W5 538 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-211ENST00000559850 LDHBP07195 334 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 RASA3Q14644 834 aa18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 RGMBQ6NW40 437 aa18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 CDAN1Q8IWY9 1227 aa18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 ABCF2Q9UG63 623 aa18.28■□□□□ 0.52
RABGGTA-211ENST00000559850 MAST3O60307 1309 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 ZNF157P51786 506 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 HDLBPQ00341 1268 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 TBC1D9Q6ZT07 1266 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 HHIPL1Q96JK4 782 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 GPR108Q9NPR9 543 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 SNRKQ9NRH2 765 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 OTOFQ9HC10 1997 aa18.27■□□□□ 0.52
RABGGTA-211ENST00000559850 FAM155AB1AL88 458 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 NF2P35240 595 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 MCAMP43121 646 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 TTC39AQ5SRH9 613 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 IL1RAPL2Q9NP60 686 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 DAGLAQ9Y4D2 1042 aa18.26■□□□□ 0.51
RABGGTA-211ENST00000559850 PCNTO95613 3336 aa18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 FOXN1O15353 648 aa18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 TMEM39BQ9GZU3 492 aa18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
RABGGTA-211ENST00000559850 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 AACSQ86V21 672 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 RASAL3Q86YV0 1011 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 WBP1LQ9NX94 342 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 PPP2R3BQ9Y5P8 575 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
RABGGTA-211ENST00000559850 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 HMMRO75330 724 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 FKBP1BP68106 108 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 CCDC158Q5M9N0 1113 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 ZNF384Q8TF68 577 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
RABGGTA-211ENST00000559850 ZBTB22O15209 634 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 SLC10A3P09131 477 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 MECOMQ03112 1051 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 CDC42EP5Q6NZY7 148 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 ARMC9Q7Z3E5 817 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms