RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 HHIPQ96QV1 700 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 LATS2Q9NRM7 1088 aa6.09□□□□□ -1.43
CASC4-210ENST00000559550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
CASC4-210ENST00000559550 FSCN2O14926 492 aa6.08□□□□□ -1.44
CASC4-210ENST00000559550 DSC3Q14574 896 aa6.08□□□□□ -1.44
CASC4-210ENST00000559550 PEAR1Q5VY43 1037 aaPredicted RBP6.08□□□□□ -1.44
CASC4-210ENST00000559550 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
CASC4-210ENST00000559550 LEMD3Q9Y2U8 911 aa6.08□□□□□ -1.44
CASC4-210ENST00000559550 NFKBIEO00221 500 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 TREHO43280 583 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 ALKBH8Q96BT7 664 aaKnown RBP6.07□□□□□ -1.44
CASC4-210ENST00000559550 KLHDC7BQ96G42 594 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 SPACA7Q96KW9 195 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 DMRTB1Q96MA1 342 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 PBX4Q9BYU1 374 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 DZANK1Q9NVP4 752 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 CARMIL2Q6F5E8 1435 aa6.07□□□□□ -1.44
CASC4-210ENST00000559550 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
CASC4-210ENST00000559550 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
CASC4-210ENST00000559550 CDC27P30260 824 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 CPSF6Q16630 551 aaKnown RBP eCLIP6.06□□□□□ -1.44
CASC4-210ENST00000559550 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 PMEPA1Q969W9 287 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 ASB16Q96NS5 453 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 POP1Q99575 1024 aaKnown RBP6.06□□□□□ -1.44
CASC4-210ENST00000559550 ZKSCAN3Q9BRR0 538 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 LACRTQ9GZZ8 138 aa6.06□□□□□ -1.44
CASC4-210ENST00000559550 PAK6Q9NQU5 681 aaPredicted RBP6.06□□□□□ -1.44
CASC4-210ENST00000559550 EDN3P14138 238 aa6.05□□□□□ -1.44
CASC4-210ENST00000559550 EPHA1P21709 976 aa6.05□□□□□ -1.44
CASC4-210ENST00000559550 MAP4P27816 1152 aaKnown RBP6.05□□□□□ -1.44
CASC4-210ENST00000559550 CSRNP1Q96S65 589 aa6.05□□□□□ -1.44
CASC4-210ENST00000559550 OSMRQ99650 979 aa6.05□□□□□ -1.44
CASC4-210ENST00000559550 ATG3Q9NT62 314 aa6.05□□□□□ -1.44
CASC4-210ENST00000559550 CPNE3O75131 537 aaKnown RBP6.04□□□□□ -1.44
CASC4-210ENST00000559550 SMNDC1O75940 238 aaKnown RBP eCLIP6.04□□□□□ -1.44
CASC4-210ENST00000559550 CDC25BP30305 580 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 PLCB3Q01970 1234 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 SGO2Q562F6 1265 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 DNAJC14Q6Y2X3 702 aaPredicted RBP6.04□□□□□ -1.44
CASC4-210ENST00000559550 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 SETDB2Q96T68 719 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 RNF208Q9H0X6 261 aa6.04□□□□□ -1.44
CASC4-210ENST00000559550 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
CASC4-210ENST00000559550 A0A1W2PP55 124 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 PDE2AO00408 941 aaPredicted RBP6.03□□□□□ -1.44
CASC4-210ENST00000559550 NEFLP07196 543 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 FMR1Q06787 632 aaKnown RBP eCLIP6.03□□□□□ -1.44
CASC4-210ENST00000559550 ZSCAN29Q8IWY8 852 aaPredicted RBP6.03□□□□□ -1.44
CASC4-210ENST00000559550 FBXL6Q8N531 539 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 GIMAP7Q8NHV1 300 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
CASC4-210ENST00000559550 NXPE3Q969Y0 559 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 CCDC74AQ96AQ1 378 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 OSBPL1AQ9BXW6 950 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 DNAJC25Q9H1X3 360 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 NPHS2Q9NP85 383 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 SEC31BQ9NQW1 1179 aa6.03□□□□□ -1.44
CASC4-210ENST00000559550 BSDC1Q9NW68 430 aaPredicted RBP6.03□□□□□ -1.44
CASC4-210ENST00000559550 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
CASC4-210ENST00000559550 ANKRD33BA6NCL7 494 aa6.02□□□□□ -1.45
CASC4-210ENST00000559550 METTL12A8MUP2 240 aa6.02□□□□□ -1.45
CASC4-210ENST00000559550 P4HBP07237 508 aaKnown RBP6.02□□□□□ -1.45
CASC4-210ENST00000559550 TRIM26Q12899 539 aaPredicted RBP6.02□□□□□ -1.45
CASC4-210ENST00000559550 ENOX2Q16206 610 aaKnown RBP6.02□□□□□ -1.45
CASC4-210ENST00000559550 PI16Q6UXB8 463 aa6.02□□□□□ -1.45
CASC4-210ENST00000559550 TMEM102Q8N9M5 508 aaPredicted RBP6.02□□□□□ -1.45
CASC4-210ENST00000559550 AGBL5Q8NDL9 886 aa6.02□□□□□ -1.45
CASC4-210ENST00000559550 ZBTB7CA1YPR0 619 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 MEGF11A6BM72 1044 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 MAPK8P45983 427 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 WFDC3Q8IUB2 231 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 TCF12Q99081 682 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 BHLHE41Q9C0J9 482 aaPredicted RBP6.01□□□□□ -1.45
CASC4-210ENST00000559550 ADAM19Q9H013 955 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 WWC3Q9ULE0 1092 aa6.01□□□□□ -1.45
CASC4-210ENST00000559550 PTPRAP18433 802 aa6□□□□□ -1.45
CASC4-210ENST00000559550 CCDC27Q2M243 656 aa6□□□□□ -1.45
CASC4-210ENST00000559550 SPRED3Q2MJR0 410 aa6□□□□□ -1.45
CASC4-210ENST00000559550 KIAA0319Q5VV43 1072 aa6□□□□□ -1.45
CASC4-210ENST00000559550 FAM117BQ6P1L5 589 aa6□□□□□ -1.45
CASC4-210ENST00000559550 CILP2Q8IUL8 1156 aa6□□□□□ -1.45
CASC4-210ENST00000559550 CCNJLQ8IV13 435 aa6□□□□□ -1.45
CASC4-210ENST00000559550 FLCNQ8NFG4 579 aa6□□□□□ -1.45
CASC4-210ENST00000559550 WNT8BQ93098 351 aa6□□□□□ -1.45
CASC4-210ENST00000559550 RUSC1Q9BVN2 902 aa6□□□□□ -1.45
CASC4-210ENST00000559550 SOX13Q9UN79 622 aa6□□□□□ -1.45
CASC4-210ENST00000559550 CYP26A1O43174 497 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 ZNF865P0CJ78 1059 aaPredicted RBP5.99□□□□□ -1.45
CASC4-210ENST00000559550 ADMP35318 185 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 GRIA4P48058 902 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
CASC4-210ENST00000559550 HGSNATQ68CP4 663 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 FDX2Q6P4F2 183 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 VN1R5Q7Z5H4 357 aa5.99□□□□□ -1.45
CASC4-210ENST00000559550 NPAS4Q8IUM7 802 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms