RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 A0A1B0GUL7 405 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
SPG11-216ENST00000559347 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
SPG11-216ENST00000559347 MAP2K2P36507 400 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 PHKA1P46020 1223 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 CRKP46108 304 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
SPG11-216ENST00000559347 TFCP2Q12800 502 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 POLA2Q14181 598 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 SSH3Q8TE77 659 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 PPP2R3BQ9Y5P8 575 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 MAST3O60307 1309 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 ZBTB22O15209 634 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 SLC10A3P09131 477 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 NF2P35240 595 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
SPG11-216ENST00000559347 NOGQ13253 232 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 DEFB129Q9H1M3 183 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 VEZTQ9HBM0 779 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 RCAN3Q9UKA8 241 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
SPG11-216ENST00000559347 SEMA3EO15041 775 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
SPG11-216ENST00000559347 COL13A1Q5TAT6 717 aaPredicted RBP13.55□□□□□ -0.24
SPG11-216ENST00000559347 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
SPG11-216ENST00000559347 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 PDS5AQ29RF7 1337 aaKnown RBP13.55□□□□□ -0.24
SPG11-216ENST00000559347 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
SPG11-216ENST00000559347 MS4A1P11836 297 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 PRDX5P30044 214 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 TIMM10P62072 90 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 RASGRF1Q13972 1273 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
SPG11-216ENST00000559347 CEP85Q6P2H3 762 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 ZIC5Q96T25 663 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 TDRD3Q9H7E2 651 aaKnown RBP13.54□□□□□ -0.24
SPG11-216ENST00000559347 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
SPG11-216ENST00000559347 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
SPG11-216ENST00000559347 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
SPG11-216ENST00000559347 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
SPG11-216ENST00000559347 HSPA8P11142 646 aaKnown RBP13.53□□□□□ -0.24
SPG11-216ENST00000559347 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
SPG11-216ENST00000559347 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPG11-216ENST00000559347 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
SPG11-216ENST00000559347 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
SPG11-216ENST00000559347 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
SPG11-216ENST00000559347 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
SPG11-216ENST00000559347 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 RASA3Q14644 834 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 BEGAINQ9BUH8 593 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 MRIQ9BWK5 157 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 FZD1Q9UP38 647 aa13.52□□□□□ -0.25
SPG11-216ENST00000559347 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
SPG11-216ENST00000559347 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
SPG11-216ENST00000559347 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
SPG11-216ENST00000559347 PRKG1Q13976 671 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 DIXDC1Q155Q3 683 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 APOBEC3HQ6NTF7 200 aaKnown RBP13.51□□□□□ -0.25
SPG11-216ENST00000559347 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 GPR108Q9NPR9 543 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 DDX19BQ9UMR2 479 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 ANGEL1Q9UNK9 670 aaKnown RBP13.51□□□□□ -0.25
SPG11-216ENST00000559347 COG6Q9Y2V7 657 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
SPG11-216ENST00000559347 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
SPG11-216ENST00000559347 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 CA12O43570 354 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 SURF6O75683 361 aaKnown RBP13.5□□□□□ -0.25
SPG11-216ENST00000559347 TNNI2P48788 182 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 LBX1P52954 281 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 CACNB3P54284 484 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
SPG11-216ENST00000559347 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
SPG11-216ENST00000559347 TNNI3KQ59H18 835 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 NBPF12Q5TAG4 269 aaPredicted RBP13.5□□□□□ -0.25
SPG11-216ENST00000559347 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
SPG11-216ENST00000559347 TMEM39BQ9GZU3 492 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 FPGT-TNNI3KV9GXZ4 949 aa13.5□□□□□ -0.25
SPG11-216ENST00000559347 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
SPG11-216ENST00000559347 C20orf194Q5TEA3 1177 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms