RNA–Protein interactions for RNA: ENST00000559304.5

KNSTRN-206, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-206ENST00000559304 NHLH1Q02575 133 aa12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 ANP32EQ9BTT0 268 aa12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
KNSTRN-206ENST00000559304 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 SLAIN1Q8ND83 568 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 DDX19BQ9UMR2 479 aa12.65□□□□□ -0.38
KNSTRN-206ENST00000559304 CCL15-CCL14A0A0B4J2E2 113 aa12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 FAM86C2PA6NEL3 165 aa12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 CCL15Q16663 113 aa12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
KNSTRN-206ENST00000559304 LRRC37AA6NMS7 1700 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 G3V3G9 751 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 WNT10BO00744 389 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 NTSR2O95665 410 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 CLCN6P51797 869 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 GRAPQ13588 217 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 APOBEC3FQ8IUX4 373 aaKnown RBP12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 GMLQ99445 158 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 EYA3Q99504 573 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 POLLQ9UGP5 575 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
KNSTRN-206ENST00000559304 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 CACNA1GO43497 2377 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 GPR37L1O60883 481 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 INHAP05111 366 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 PRKCZQ05513 592 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 TEFQ10587 303 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 C11orf16Q9NQ32 467 aa12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
KNSTRN-206ENST00000559304 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 SASH1O94885 1247 aa12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 RLBP1P12271 317 aa12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 COL26A1Q96A83 441 aa12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
KNSTRN-206ENST00000559304 HMOX1P09601 288 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 TRIM27P14373 513 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 TMC4Q7Z404 712 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 XIRP2A4UGR9 3374 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 NUP98P52948 1817 aa12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 TCF20Q9UGU0 1960 aaKnown RBP12.6□□□□□ -0.39
KNSTRN-206ENST00000559304 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 KCNQ3O43525 872 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 VAMP4O75379 141 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 GTF2A2P52657 109 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 GRIN2CQ14957 1233 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
KNSTRN-206ENST00000559304 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 ADCY3O60266 1144 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 ELNP15502 786 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 GPSM2P81274 684 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 PPP1R42Q7Z4L9 355 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 LAMB2P55268 1798 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 PSME4Q14997 1843 aa12.58□□□□□ -0.4
KNSTRN-206ENST00000559304 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
KNSTRN-206ENST00000559304 ST18O60284 1047 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms