RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HELLSQ9NRZ9 838 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 RAD50Q92878 1312 aa21.79■■□□□ 1.08
CLPX-203ENST00000558958 APPBP2Q92624 585 aa21.79■■□□□ 1.08
CLPX-203ENST00000558958 OSBP2Q969R2 916 aa21.79■■□□□ 1.08
CLPX-203ENST00000558958 SUGT1Q9Y2Z0 365 aa21.79■■□□□ 1.08
CLPX-203ENST00000558958 LMNB1P20700 586 aa21.78■■□□□ 1.08
CLPX-203ENST00000558958 GPR162Q16538 588 aa21.78■■□□□ 1.08
CLPX-203ENST00000558958 MCMDC2Q4G0Z9 681 aa21.78■■□□□ 1.08
CLPX-203ENST00000558958 SEC62Q99442 399 aaKnown RBP21.78■■□□□ 1.08
CLPX-203ENST00000558958 MXD3Q9BW11 206 aa21.78■■□□□ 1.08
CLPX-203ENST00000558958 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
CLPX-203ENST00000558958 EIF5BO60841 1220 aaKnown RBP21.77■■□□□ 1.08
CLPX-203ENST00000558958 RAD17O75943 681 aa21.77■■□□□ 1.08
CLPX-203ENST00000558958 NAA16Q6N069 864 aaPredicted RBP21.77■■□□□ 1.08
CLPX-203ENST00000558958 DZIP1Q86YF9 867 aaKnown RBP21.77■■□□□ 1.08
CLPX-203ENST00000558958 MAST3O60307 1309 aa21.77■■□□□ 1.08
CLPX-203ENST00000558958 VIL1P09327 827 aaKnown RBP21.77■■□□□ 1.07
CLPX-203ENST00000558958 CYP7A1P22680 504 aa21.77■■□□□ 1.07
CLPX-203ENST00000558958 PUS7LQ9H0K6 701 aaKnown RBP21.77■■□□□ 1.07
CLPX-203ENST00000558958 PSME4Q14997 1843 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 FZD9O00144 591 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 PSMD14O00487 310 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 CXCL9Q07325 125 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 ADGRA1Q86SQ6 560 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 ZNF589Q86UQ0 364 aaPredicted RBP21.76■■□□□ 1.07
CLPX-203ENST00000558958 UTRNP46939 3433 aa21.76■■□□□ 1.07
CLPX-203ENST00000558958 M0R2C6 588 aa21.75■■□□□ 1.07
CLPX-203ENST00000558958 GRIN3BO60391 1043 aa21.75■■□□□ 1.07
CLPX-203ENST00000558958 REC8O95072 547 aa21.75■■□□□ 1.07
CLPX-203ENST00000558958 MFAP1P55081 439 aaKnown RBP21.75■■□□□ 1.07
CLPX-203ENST00000558958 GSTO1P78417 241 aa21.75■■□□□ 1.07
CLPX-203ENST00000558958 MAST2Q6P0Q8 1798 aa21.74■■□□□ 1.07
CLPX-203ENST00000558958 CCDC88AQ3V6T2 1871 aa21.74■■□□□ 1.07
CLPX-203ENST00000558958 CIAPIN1Q6FI81 312 aa21.74■■□□□ 1.07
CLPX-203ENST00000558958 RSBN1LQ6PCB5 846 aaPredicted RBP21.74■■□□□ 1.07
CLPX-203ENST00000558958 CCDC129Q6ZRS4 1044 aa21.74■■□□□ 1.07
CLPX-203ENST00000558958 SBF1O95248 1867 aa21.74■■□□□ 1.07
CLPX-203ENST00000558958 CCDC171Q6TFL3 1326 aa21.73■■□□□ 1.07
CLPX-203ENST00000558958 MYO3BQ8WXR4 1341 aa21.73■■□□□ 1.07
CLPX-203ENST00000558958 DIXDC1Q155Q3 683 aa21.73■■□□□ 1.07
CLPX-203ENST00000558958 TTF2Q9UNY4 1162 aaKnown RBP21.73■■□□□ 1.07
CLPX-203ENST00000558958 F8W031 263 aaPredicted RBP21.72■■□□□ 1.07
CLPX-203ENST00000558958 LDHCP07864 332 aa21.72■■□□□ 1.07
CLPX-203ENST00000558958 TNIP1Q15025 636 aa21.72■■□□□ 1.07
CLPX-203ENST00000558958 SLF2Q8IX21 1173 aa21.72■■□□□ 1.07
CLPX-203ENST00000558958 FAM163AQ96GL9 167 aaPredicted RBP21.72■■□□□ 1.07
CLPX-203ENST00000558958 GMLQ99445 158 aa21.72■■□□□ 1.07
CLPX-203ENST00000558958 ANO2Q9NQ90 1003 aa21.72■■□□□ 1.07
CLPX-203ENST00000558958 DICER1Q9UPY3 1922 aaKnown RBP21.72■■□□□ 1.07
CLPX-203ENST00000558958 GPAA1O43292 621 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 EIF6P56537 245 aaKnown RBP21.71■■□□□ 1.07
CLPX-203ENST00000558958 KIAA0825Q8IV33 1275 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 MIGA1Q8NAN2 632 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 AIDAQ96BJ3 306 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
CLPX-203ENST00000558958 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 AGBL3Q8NEM8 1001 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 MRIQ9BWK5 157 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 RNF181Q9P0P0 153 aa21.71■■□□□ 1.07
CLPX-203ENST00000558958 MROH7-TTC4A0A0A0MT08 1334 aa21.7■■□□□ 1.06
CLPX-203ENST00000558958 GAKO14976 1311 aa21.7■■□□□ 1.06
CLPX-203ENST00000558958 MAGEB6P1A0A0J9YX57 407 aa21.7■■□□□ 1.06
CLPX-203ENST00000558958 MBD4O95243 580 aa21.7■■□□□ 1.06
CLPX-203ENST00000558958 STRBPQ96SI9 672 aaKnown RBP21.7■■□□□ 1.06
CLPX-203ENST00000558958 RIOK1Q9BRS2 568 aaKnown RBP21.7■■□□□ 1.06
CLPX-203ENST00000558958 USP26Q9BXU7 913 aa21.7■■□□□ 1.06
CLPX-203ENST00000558958 ZBTB12Q9Y330 459 aaPredicted RBP21.7■■□□□ 1.06
CLPX-203ENST00000558958 EPB41L2O43491 1005 aaKnown RBP21.69■■□□□ 1.06
CLPX-203ENST00000558958 SCNN1DP51172 638 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 HDLBPQ00341 1268 aaKnown RBP21.69■■□□□ 1.06
CLPX-203ENST00000558958 PTH1RQ03431 593 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 C9orf131Q5VYM1 1079 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 HHIPL2Q6UWX4 724 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 LCORLQ8N3X6 602 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 ARMT1Q9H993 441 aa21.69■■□□□ 1.06
CLPX-203ENST00000558958 UPF2Q9HAU5 1272 aaKnown RBP21.69■■□□□ 1.06
CLPX-203ENST00000558958 ZNF541Q9H0D2 1346 aa21.68■■□□□ 1.06
CLPX-203ENST00000558958 MYH2Q9UKX2 1941 aa21.68■■□□□ 1.06
CLPX-203ENST00000558958 GPR75-ASB3A0A0A6YYF3 556 aa21.68■■□□□ 1.06
CLPX-203ENST00000558958 DAGLAQ9Y4D2 1042 aa21.68■■□□□ 1.06
CLPX-203ENST00000558958 HSPD1P10809 573 aaKnown RBP21.67■■□□□ 1.06
CLPX-203ENST00000558958 PPP4CP60510 307 aa21.67■■□□□ 1.06
CLPX-203ENST00000558958 DYNLL1P63167 89 aaKnown RBP21.67■■□□□ 1.06
CLPX-203ENST00000558958 VPS53Q5VIR6 699 aa21.67■■□□□ 1.06
CLPX-203ENST00000558958 MAP4K1Q92918 833 aa21.67■■□□□ 1.06
CLPX-203ENST00000558958 TEKT1Q969V4 418 aa21.67■■□□□ 1.06
CLPX-203ENST00000558958 AATFQ9NY61 560 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLPX-203ENST00000558958 SERPINA10Q9UK55 444 aa21.67■■□□□ 1.06
CLPX-203ENST00000558958 FOXP2O15409 715 aa21.66■■□□□ 1.06
CLPX-203ENST00000558958 BAG3O95817 575 aa21.66■■□□□ 1.06
CLPX-203ENST00000558958 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
CLPX-203ENST00000558958 CRKP46108 304 aa21.66■■□□□ 1.06
CLPX-203ENST00000558958 DSCC1Q9BVC3 393 aa21.66■■□□□ 1.06
CLPX-203ENST00000558958 GNAT2P19087 354 aa21.65■■□□□ 1.06
CLPX-203ENST00000558958 BTDP43251 543 aa21.65■■□□□ 1.06
CLPX-203ENST00000558958 CERS3Q8IU89 383 aa21.65■■□□□ 1.06
CLPX-203ENST00000558958 ZDHHC15Q96MV8 337 aa21.65■■□□□ 1.06
CLPX-203ENST00000558958 NOL10Q9BSC4 688 aaKnown RBP21.65■■□□□ 1.06
CLPX-203ENST00000558958 USP17L8P0C7I0 530 aa21.64■■□□□ 1.06
CLPX-203ENST00000558958 C22orf23Q9BZE7 217 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms