RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CD209Q9NNX6 404 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 TSKSQ9UJT2 592 aa10.15□□□□□ -0.78
TRAF3-205ENST00000558700 IL1R1P14778 569 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 FKBP1AP62942 108 aaKnown RBP10.14□□□□□ -0.79
TRAF3-205ENST00000558700 CHRDL2Q6WN34 429 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 RASAL3Q86YV0 1011 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
TRAF3-205ENST00000558700 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
TRAF3-205ENST00000558700 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 SAGE1Q9NXZ1 904 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 CASP8AP2Q9UKL3 1982 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 LAMB1P07942 1786 aa10.14□□□□□ -0.79
TRAF3-205ENST00000558700 MROH5Q6ZUA9 1318 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 SNAP23O00161 211 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 DPYSL4O14531 572 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 MYO1BO43795 1136 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 PLIN1O60240 522 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-205ENST00000558700 SLFN5Q08AF3 891 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 UBE4AQ14139 1066 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 TTLL12Q14166 644 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-205ENST00000558700 DLGAP5Q15398 846 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 ABHD8Q96I13 439 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 ZBED3Q96IU2 234 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-205ENST00000558700 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 PPP2R3BQ9Y5P8 575 aa10.13□□□□□ -0.79
TRAF3-205ENST00000558700 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-205ENST00000558700 NBPF7P0C2Y1 421 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-205ENST00000558700 PDE4DQ08499 809 aa10.12□□□□□ -0.79
TRAF3-205ENST00000558700 RABL6Q3YEC7 729 aaPredicted RBP10.12□□□□□ -0.79
TRAF3-205ENST00000558700 CERS5Q8N5B7 392 aa10.12□□□□□ -0.79
TRAF3-205ENST00000558700 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
TRAF3-205ENST00000558700 ZIC5Q96T25 663 aa10.12□□□□□ -0.79
TRAF3-205ENST00000558700 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
TRAF3-205ENST00000558700 OTOFQ9HC10 1997 aa10.12□□□□□ -0.79
TRAF3-205ENST00000558700 FAM205AQ6ZU69 1335 aa10.11□□□□□ -0.79
TRAF3-205ENST00000558700 TRIM66O15016 1216 aa10.11□□□□□ -0.79
TRAF3-205ENST00000558700 ARMC9Q7Z3E5 817 aa10.11□□□□□ -0.79
TRAF3-205ENST00000558700 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
TRAF3-205ENST00000558700 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
TRAF3-205ENST00000558700 SCAF8Q9UPN6 1271 aaKnown RBP10.11□□□□□ -0.79
TRAF3-205ENST00000558700 SSC5DA1L4H1 1573 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 F8W031 263 aaPredicted RBP10.1□□□□□ -0.79
TRAF3-205ENST00000558700 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 HIBADHP31937 336 aaKnown RBP10.1□□□□□ -0.79
TRAF3-205ENST00000558700 CFAP100Q494V2 611 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 METTL24Q5JXM2 366 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 MFSD14BQ5SR56 506 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 PRAMEF18Q5VWM3 479 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 VPS37DQ86XT2 251 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 JAG2Q9Y219 1238 aa10.1□□□□□ -0.79
TRAF3-205ENST00000558700 KIF16BQ96L93 1317 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 UBE2Q2LH0YL09 131 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 TRPA1O75762 1119 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 GYG1P46976 350 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 RBM5P52756 815 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAF3-205ENST00000558700 SREBF2Q12772 1141 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 DGKZQ13574 1117 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 CAVIN4Q5BKX8 364 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 TDRD7Q8NHU6 1098 aaKnown RBP10.09□□□□□ -0.79
TRAF3-205ENST00000558700 PUS3Q9BZE2 481 aaKnown RBP10.09□□□□□ -0.79
TRAF3-205ENST00000558700 MCOLN1Q9GZU1 580 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 RNF186Q9NXI6 227 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 RIPOR2Q9Y4F9 1068 aa10.09□□□□□ -0.79
TRAF3-205ENST00000558700 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 PPP1R12BO60237 982 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 TIE1P35590 1138 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 TBC1D22AQ8WUA7 517 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 FAM84BQ96KN1 310 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 API5Q9BZZ5 524 aaKnown RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 USP44Q9H0E7 712 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 DEFB129Q9H1M3 183 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 ANGEL1Q9UNK9 670 aaKnown RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
TRAF3-205ENST00000558700 HDAC5Q9UQL6 1122 aa10.08□□□□□ -0.8
TRAF3-205ENST00000558700 MAST3O60307 1309 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 CCDC85CA6NKD9 419 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 PDE8BO95263 885 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 UBTFL1P0CB47 393 aaPredicted RBP10.07□□□□□ -0.8
TRAF3-205ENST00000558700 PRKG1Q13976 671 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
TRAF3-205ENST00000558700 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 SUPT20HL1Q3ZLR7 823 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 LRRC24Q50LG9 513 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
TRAF3-205ENST00000558700 VGLL2Q8N8G2 317 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
TRAF3-205ENST00000558700 UNCXA6NJT0 531 aa10.06□□□□□ -0.8
TRAF3-205ENST00000558700 IFIT1P09914 478 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms