RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 GRIK5Q16478 980 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 TMEM57Q8N5G2 664 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 MRIQ9BWK5 157 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 SUGT1Q9Y2Z0 365 aa19.27■□□□□ 0.68
CSHL1-208ENST00000558609 CRKP46108 304 aa19.26■□□□□ 0.67
CSHL1-208ENST00000558609 TTLL12Q14166 644 aaPredicted RBP19.26■□□□□ 0.67
CSHL1-208ENST00000558609 SPDYE2Q495Y8 402 aa19.26■□□□□ 0.67
CSHL1-208ENST00000558609 ARMC9Q7Z3E5 817 aa19.26■□□□□ 0.67
CSHL1-208ENST00000558609 RASAL3Q86YV0 1011 aa19.26■□□□□ 0.67
CSHL1-208ENST00000558609 DZIP1LQ8IYY4 767 aaKnown RBP19.26■□□□□ 0.67
CSHL1-208ENST00000558609 ZBTB22O15209 634 aa19.25■□□□□ 0.67
CSHL1-208ENST00000558609 WDR66Q8TBY9 1149 aa19.25■□□□□ 0.67
CSHL1-208ENST00000558609 VEZTQ9HBM0 779 aa19.25■□□□□ 0.67
CSHL1-208ENST00000558609 ZNF70Q9UC06 446 aaPredicted RBP19.25■□□□□ 0.67
CSHL1-208ENST00000558609 LDLRAD1Q5T700 205 aa19.24■□□□□ 0.67
CSHL1-208ENST00000558609 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
CSHL1-208ENST00000558609 TDRD3Q9H7E2 651 aaKnown RBP19.24■□□□□ 0.67
CSHL1-208ENST00000558609 GNL3LQ9NVN8 582 aaKnown RBP19.24■□□□□ 0.67
CSHL1-208ENST00000558609 TNFAIP1Q13829 316 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 RASA3Q14644 834 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 MAP3K11Q16584 847 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 MAST3O60307 1309 aa19.23■□□□□ 0.67
CSHL1-208ENST00000558609 SEMA3EO15041 775 aa19.22■□□□□ 0.67
CSHL1-208ENST00000558609 PRKG1Q13976 671 aa19.22■□□□□ 0.67
CSHL1-208ENST00000558609 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
CSHL1-208ENST00000558609 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
CSHL1-208ENST00000558609 PNMA6EA0A0J9YXQ4 647 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 SSC5DA1L4H1 1573 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 PPP1R12BO60237 982 aaPredicted RBP19.21■□□□□ 0.67
CSHL1-208ENST00000558609 PHKA1P46020 1223 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 TIMM10P62072 90 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 NBPF12Q5TAG4 269 aaPredicted RBP19.21■□□□□ 0.67
CSHL1-208ENST00000558609 HHIPL2Q6UWX4 724 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 SAGE1Q9NXZ1 904 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 ANGEL1Q9UNK9 670 aaKnown RBP19.21■□□□□ 0.67
CSHL1-208ENST00000558609 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
CSHL1-208ENST00000558609 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
CSHL1-208ENST00000558609 RLBP1P12271 317 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 ADORA1P30542 326 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 TFCP2Q12800 502 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 DGKZQ13574 1117 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 CCDC102BQ68D86 513 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 RNF186Q9NXI6 227 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 DENND2AQ9ULE3 1009 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 SALL1Q9NSC2 1324 aa19.2■□□□□ 0.66
CSHL1-208ENST00000558609 A0A1B0GUL7 405 aa19.19■□□□□ 0.66
CSHL1-208ENST00000558609 UNCXA6NJT0 531 aa19.19■□□□□ 0.66
CSHL1-208ENST00000558609 APOBEC3HQ6NTF7 200 aaKnown RBP19.19■□□□□ 0.66
CSHL1-208ENST00000558609 FZD1Q9UP38 647 aa19.19■□□□□ 0.66
CSHL1-208ENST00000558609 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 TNNI2P48788 182 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 G3BP1Q13283 466 aaKnown RBP eCLIP19.18■□□□□ 0.66
CSHL1-208ENST00000558609 POLA2Q14181 598 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 ITPRIPQ8IWB1 547 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 TEPSINQ96N21 525 aa19.18■□□□□ 0.66
CSHL1-208ENST00000558609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.18■□□□□ 0.66
CSHL1-208ENST00000558609 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 USP2O75604 605 aaPredicted RBP19.17■□□□□ 0.66
CSHL1-208ENST00000558609 TRPA1O75762 1119 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 FKBP1CQ5VVH2 108 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 SLC10A4Q96EP9 437 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 XAGE2Q96GT9 111 aa19.17■□□□□ 0.66
CSHL1-208ENST00000558609 PDS5AQ29RF7 1337 aaKnown RBP19.17■□□□□ 0.66
CSHL1-208ENST00000558609 LDHBP07195 334 aaKnown RBP19.16■□□□□ 0.66
CSHL1-208ENST00000558609 PRDX5P30044 214 aa19.16■□□□□ 0.66
CSHL1-208ENST00000558609 IREB2P48200 963 aaKnown RBP19.16■□□□□ 0.66
CSHL1-208ENST00000558609 TM4SF4P48230 202 aa19.16■□□□□ 0.66
CSHL1-208ENST00000558609 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
CSHL1-208ENST00000558609 SPRYD7Q5W111 196 aa19.16■□□□□ 0.66
CSHL1-208ENST00000558609 TNRC18O15417 2968 aaPredicted RBP19.15■□□□□ 0.66
CSHL1-208ENST00000558609 RASGRF1Q13972 1273 aa19.15■□□□□ 0.66
CSHL1-208ENST00000558609 FAM83AQ86UY5 434 aa19.15■□□□□ 0.66
CSHL1-208ENST00000558609 ZGPATQ8N5A5 531 aaKnown RBP19.15■□□□□ 0.66
CSHL1-208ENST00000558609 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
CSHL1-208ENST00000558609 TMOD2Q9NZR1 351 aa19.15■□□□□ 0.66
CSHL1-208ENST00000558609 CASP8AP2Q9UKL3 1982 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 MS4A1P11836 297 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 CACNB3P54284 484 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 CDAN1Q8IWY9 1227 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 ANKRD13AQ8IZ07 590 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 NEUROD6Q96NK8 337 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
CSHL1-208ENST00000558609 SREBF2Q12772 1141 aa19.13■□□□□ 0.65
CSHL1-208ENST00000558609 MKRN3Q13064 507 aaKnown RBP19.13■□□□□ 0.65
CSHL1-208ENST00000558609 PANK1Q8TE04 598 aa19.13■□□□□ 0.65
CSHL1-208ENST00000558609 ZBTB48P10074 688 aaPredicted RBP19.12■□□□□ 0.65
CSHL1-208ENST00000558609 WNK4Q96J92 1243 aa19.12■□□□□ 0.65
CSHL1-208ENST00000558609 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
CSHL1-208ENST00000558609 NOP58Q9Y2X3 529 aaKnown RBP19.12■□□□□ 0.65
CSHL1-208ENST00000558609 SURF6O75683 361 aaKnown RBP19.11■□□□□ 0.65
CSHL1-208ENST00000558609 INHBEP58166 350 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms