RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 RBM5P52756 815 aaKnown RBP eCLIP20.56■□□□□ 0.88
RPL28-205ENST00000558131 METTL24Q5JXM2 366 aa20.56■□□□□ 0.88
RPL28-205ENST00000558131 DZIP1LQ8IYY4 767 aaKnown RBP20.56■□□□□ 0.88
RPL28-205ENST00000558131 HPS5Q9UPZ3 1129 aa20.56■□□□□ 0.88
RPL28-205ENST00000558131 RBBP6Q7Z6E9 1792 aaKnown RBP20.55■□□□□ 0.88
RPL28-205ENST00000558131 UNCXA6NJT0 531 aa20.55■□□□□ 0.88
RPL28-205ENST00000558131 PPP1R12BO60237 982 aaPredicted RBP20.55■□□□□ 0.88
RPL28-205ENST00000558131 SOX10P56693 466 aa20.55■□□□□ 0.88
RPL28-205ENST00000558131 SUPT20HL1Q3ZLR7 823 aa20.54■□□□□ 0.88
RPL28-205ENST00000558131 IFNL1Q8IU54 200 aa20.54■□□□□ 0.88
RPL28-205ENST00000558131 MANSC4A6NHS7 340 aaPredicted RBP20.53■□□□□ 0.88
RPL28-205ENST00000558131 BCAMP50895 628 aa20.53■□□□□ 0.88
RPL28-205ENST00000558131 ATG9AQ7Z3C6 839 aa20.53■□□□□ 0.88
RPL28-205ENST00000558131 SLC10A4Q96EP9 437 aa20.53■□□□□ 0.88
RPL28-205ENST00000558131 TMEM39BQ9GZU3 492 aa20.53■□□□□ 0.88
RPL28-205ENST00000558131 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
RPL28-205ENST00000558131 TNFAIP1Q13829 316 aa20.52■□□□□ 0.88
RPL28-205ENST00000558131 SMC4Q9NTJ3 1288 aa20.52■□□□□ 0.88
RPL28-205ENST00000558131 ZSWIM8A7E2V4 1837 aa20.52■□□□□ 0.88
RPL28-205ENST00000558131 TCP10L2B9ZVM9 353 aa20.51■□□□□ 0.87
RPL28-205ENST00000558131 IREB2P48200 963 aaKnown RBP20.51■□□□□ 0.87
RPL28-205ENST00000558131 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
RPL28-205ENST00000558131 PUM3Q15397 648 aaKnown RBP20.51■□□□□ 0.87
RPL28-205ENST00000558131 PKN2Q16513 984 aaKnown RBP20.51■□□□□ 0.87
RPL28-205ENST00000558131 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.51■□□□□ 0.87
RPL28-205ENST00000558131 ANKRD13AQ8IZ07 590 aa20.51■□□□□ 0.87
RPL28-205ENST00000558131 PTPN18Q99952 460 aa20.51■□□□□ 0.87
RPL28-205ENST00000558131 TESPA1A2RU30 521 aaPredicted RBP20.5■□□□□ 0.87
RPL28-205ENST00000558131 EYA2O00167 538 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 FKTNO75072 461 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 ALDH1A1P00352 501 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 INHBEP58166 350 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 CAP1Q01518 475 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 CAVIN4Q5BKX8 364 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 VPS37DQ86XT2 251 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.5■□□□□ 0.872e-9■□□□□ 9.3
RPL28-205ENST00000558131 TBC1D22AQ8WUA7 517 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 DOCK2Q92608 1830 aa20.5■□□□□ 0.87
RPL28-205ENST00000558131 CACNB3P54284 484 aa20.49■□□□□ 0.87
RPL28-205ENST00000558131 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
RPL28-205ENST00000558131 ZDHHC15Q96MV8 337 aa20.49■□□□□ 0.87
RPL28-205ENST00000558131 ELP3Q9H9T3 547 aa20.49■□□□□ 0.87
RPL28-205ENST00000558131 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.49■□□□□ 0.87
RPL28-205ENST00000558131 RPAP1Q9BWH6 1393 aaPredicted RBP20.48■□□□□ 0.87
RPL28-205ENST00000558131 VGLL4Q14135 290 aa20.48■□□□□ 0.87
RPL28-205ENST00000558131 FBXO46Q6PJ61 603 aaPredicted RBP20.48■□□□□ 0.87
RPL28-205ENST00000558131 TEKT1Q969V4 418 aa20.48■□□□□ 0.87
RPL28-205ENST00000558131 OPTNQ96CV9 577 aa20.48■□□□□ 0.87
RPL28-205ENST00000558131 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
RPL28-205ENST00000558131 CRHR2Q13324 411 aa20.47■□□□□ 0.87
RPL28-205ENST00000558131 MRIQ9BWK5 157 aa20.47■□□□□ 0.87
RPL28-205ENST00000558131 NOB1Q9ULX3 412 aaKnown RBP20.47■□□□□ 0.87
RPL28-205ENST00000558131 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
RPL28-205ENST00000558131 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
RPL28-205ENST00000558131 LPIN2Q92539 896 aa20.46■□□□□ 0.87
RPL28-205ENST00000558131 SUGT1Q9Y2Z0 365 aa20.46■□□□□ 0.87
RPL28-205ENST00000558131 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
RPL28-205ENST00000558131 TNNI2P48788 182 aa20.45■□□□□ 0.86
RPL28-205ENST00000558131 FRAT2O75474 233 aaPredicted RBP20.44■□□□□ 0.86
RPL28-205ENST00000558131 CIAO1O76071 339 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 UBTFL1P0CB47 393 aaPredicted RBP20.44■□□□□ 0.86
RPL28-205ENST00000558131 SLC5A1P13866 664 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 FKBP1CQ5VVH2 108 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 HHIPL2Q6UWX4 724 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 FAM83AQ86UY5 434 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 BRI3BPQ8WY22 251 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 MEIS3Q99687 375 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 SIL1Q9H173 461 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
RPL28-205ENST00000558131 SNCAIPQ9Y6H5 919 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 MAST3O60307 1309 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 PDE4DIPQ5VU43 2346 aa20.44■□□□□ 0.86
RPL28-205ENST00000558131 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
RPL28-205ENST00000558131 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
RPL28-205ENST00000558131 PA2G4Q9UQ80 394 aaKnown RBP20.43■□□□□ 0.86
RPL28-205ENST00000558131 SPDYE5A6NIY4 337 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 SLC34A2O95436 690 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 PRDX5P30044 214 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 MAP3K9P80192 1104 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 DAGLAQ9Y4D2 1042 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 RFX7Q2KHR2 1363 aa20.42■□□□□ 0.86
RPL28-205ENST00000558131 ZBTB22O15209 634 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 DIXDC1Q155Q3 683 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 API5Q9BZZ5 524 aaKnown RBP20.41■□□□□ 0.86
RPL28-205ENST00000558131 TRIM17Q9Y577 477 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 SALL1Q9NSC2 1324 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 PHIPQ8WWQ0 1821 aa20.41■□□□□ 0.86
RPL28-205ENST00000558131 PTPRFP10586 1907 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 PHKA1P46020 1223 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 AK9Q5TCS8 1911 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 ATRNL1Q5VV63 1379 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 OTUD5Q96G74 571 aa20.4■□□□□ 0.86
RPL28-205ENST00000558131 COPRSQ9NQ92 184 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms