RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 HACL1Q9UJ83 578 aa25.85■■□□□ 1.73
CASC4-204ENST00000557945 IQCA1LA6NCM1 817 aa25.84■■□□□ 1.73
CASC4-204ENST00000557945 DZIP1Q86YF9 867 aaKnown RBP25.84■■□□□ 1.73
CASC4-204ENST00000557945 OSBPL3Q9H4L5 887 aa25.84■■□□□ 1.73
CASC4-204ENST00000557945 IDH1O75874 414 aaKnown RBP25.83■■□□□ 1.73
CASC4-204ENST00000557945 NMRK2Q9NPI5 230 aa25.83■■□□□ 1.73
CASC4-204ENST00000557945 MAST3O60307 1309 aa25.83■■□□□ 1.73
CASC4-204ENST00000557945 RBM26Q5T8P6 1007 aaKnown RBP25.82■■□□□ 1.72
CASC4-204ENST00000557945 GPBP1L1Q9HC44 474 aaPredicted RBP25.82■■□□□ 1.72
CASC4-204ENST00000557945 WDR90Q96KV7 1748 aa25.82■■□□□ 1.72
CASC4-204ENST00000557945 POTECB2RU33 542 aa25.82■■□□□ 1.72
CASC4-204ENST00000557945 VEGFAP15692 232 aaPredicted RBP25.82■■□□□ 1.72
CASC4-204ENST00000557945 RGS3P49796 1198 aa25.82■■□□□ 1.72
CASC4-204ENST00000557945 RBM5P52756 815 aaKnown RBP eCLIP25.82■■□□□ 1.72
CASC4-204ENST00000557945 ZNF280AP59817 542 aaPredicted RBP25.82■■□□□ 1.72
CASC4-204ENST00000557945 EPHX2P34913 555 aa25.81■■□□□ 1.72
CASC4-204ENST00000557945 MECOMQ03112 1051 aa25.81■■□□□ 1.72
CASC4-204ENST00000557945 MAP3K12Q12852 859 aa25.81■■□□□ 1.72
CASC4-204ENST00000557945 TBC1D10BQ4KMP7 808 aaPredicted RBP25.81■■□□□ 1.72
CASC4-204ENST00000557945 SAMD7Q7Z3H4 446 aa25.81■■□□□ 1.72
CASC4-204ENST00000557945 MYOZ2Q9NPC6 264 aa25.81■■□□□ 1.72
CASC4-204ENST00000557945 ADARB2Q9NS39 739 aaKnown RBP25.81■■□□□ 1.72
CASC4-204ENST00000557945 MMP14P50281 582 aa25.8■■□□□ 1.72
CASC4-204ENST00000557945 TEKT1Q969V4 418 aa25.8■■□□□ 1.72
CASC4-204ENST00000557945 TAF1DQ9H5J8 278 aaPredicted RBP25.8■■□□□ 1.72
CASC4-204ENST00000557945 TRIM6-TRIM34B2RNG4 842 aa25.79■■□□□ 1.72
CASC4-204ENST00000557945 CRKP46108 304 aa25.79■■□□□ 1.72
CASC4-204ENST00000557945 DIXDC1Q155Q3 683 aa25.79■■□□□ 1.72
CASC4-204ENST00000557945 CFAP100Q494V2 611 aa25.79■■□□□ 1.72
CASC4-204ENST00000557945 SERPINA10Q9UK55 444 aa25.79■■□□□ 1.72
CASC4-204ENST00000557945 GSTO1P78417 241 aa25.78■■□□□ 1.72
CASC4-204ENST00000557945 DLGAP5Q15398 846 aa25.78■■□□□ 1.72
CASC4-204ENST00000557945 KIF4BQ2VIQ3 1234 aa25.78■■□□□ 1.72
CASC4-204ENST00000557945 NAA16Q6N069 864 aaPredicted RBP25.78■■□□□ 1.72
CASC4-204ENST00000557945 SLF2Q8IX21 1173 aa25.78■■□□□ 1.72
CASC4-204ENST00000557945 TRPM4Q8TD43 1214 aa25.78■■□□□ 1.72
CASC4-204ENST00000557945 NSUN4Q96CB9 384 aaKnown RBP25.78■■□□□ 1.72
CASC4-204ENST00000557945 SCN4AP35499 1836 aa25.77■■□□□ 1.72
CASC4-204ENST00000557945 EGFRP00533 1210 aa25.77■■□□□ 1.72
CASC4-204ENST00000557945 HDLBPQ00341 1268 aaKnown RBP25.77■■□□□ 1.72
CASC4-204ENST00000557945 EAPPQ56P03 285 aaPredicted RBP25.77■■□□□ 1.72
CASC4-204ENST00000557945 TTC22Q5TAA0 569 aa25.77■■□□□ 1.72
CASC4-204ENST00000557945 RILPL2Q969X0 211 aa25.77■■□□□ 1.72
CASC4-204ENST00000557945 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.77■■□□□ 1.727e-14■■□□□ 14.2
CASC4-204ENST00000557945 SLC9C2Q5TAH2 1124 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 MAGEB6Q8N7X4 407 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 KBTBD3Q8NAB2 608 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 ZNF784Q8NCA9 323 aaPredicted RBP25.76■■□□□ 1.71
CASC4-204ENST00000557945 EVI5LQ96CN4 794 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 FSD1Q9BTV5 496 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 MRIQ9BWK5 157 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 PCDHAC2Q9Y5I4 1007 aa25.76■■□□□ 1.71
CASC4-204ENST00000557945 IGSF3O75054 1194 aa25.75■■□□□ 1.71
CASC4-204ENST00000557945 LDHCP07864 332 aa25.75■■□□□ 1.71
CASC4-204ENST00000557945 HHIPL2Q6UWX4 724 aa25.75■■□□□ 1.71
CASC4-204ENST00000557945 USP50Q70EL3 339 aaPredicted RBP25.75■■□□□ 1.71
CASC4-204ENST00000557945 CNTROBQ8N137 903 aa25.75■■□□□ 1.71
CASC4-204ENST00000557945 ZNF384Q8TF68 577 aa25.75■■□□□ 1.71
CASC4-204ENST00000557945 PDE6AP16499 860 aa25.74■■□□□ 1.71
CASC4-204ENST00000557945 CYP7A1P22680 504 aa25.74■■□□□ 1.71
CASC4-204ENST00000557945 ZSCAN25Q6NSZ9 544 aa25.74■■□□□ 1.71
CASC4-204ENST00000557945 PNMA8AQ86V59 439 aaPredicted RBP25.74■■□□□ 1.71
CASC4-204ENST00000557945 DAGLAQ9Y4D2 1042 aa25.74■■□□□ 1.71
CASC4-204ENST00000557945 MYO5AQ9Y4I1 1855 aaKnown RBP25.74■■□□□ 1.71
CASC4-204ENST00000557945 MROH7-TTC4A0A0A0MT08 1334 aa25.73■■□□□ 1.71
CASC4-204ENST00000557945 GSPT1P15170 499 aaKnown RBP25.73■■□□□ 1.71
CASC4-204ENST00000557945 HIRAP54198 1017 aaPredicted RBP25.73■■□□□ 1.71
CASC4-204ENST00000557945 MTMR14Q8NCE2 650 aa25.73■■□□□ 1.71
CASC4-204ENST00000557945 ZDHHC15Q96MV8 337 aa25.73■■□□□ 1.71
CASC4-204ENST00000557945 SPDYE2BA6NHP3 402 aa25.72■■□□□ 1.71
CASC4-204ENST00000557945 SPDYE6P0CI01 402 aa25.72■■□□□ 1.71
CASC4-204ENST00000557945 LRRFIP1Q32MZ4 808 aaKnown RBP25.72■■□□□ 1.71
CASC4-204ENST00000557945 NBPF9Q3BBW0 867 aa25.72■■□□□ 1.71
CASC4-204ENST00000557945 PRMT6Q96LA8 375 aaPredicted RBP25.72■■□□□ 1.71
CASC4-204ENST00000557945 DOCK2Q92608 1830 aa25.72■■□□□ 1.71
CASC4-204ENST00000557945 WNT10BO00744 389 aa25.71■■□□□ 1.71
CASC4-204ENST00000557945 FAM163AQ96GL9 167 aaPredicted RBP25.71■■□□□ 1.71
CASC4-204ENST00000557945 NOL10Q9BSC4 688 aaKnown RBP25.71■■□□□ 1.71
CASC4-204ENST00000557945 CLEC11AQ9Y240 323 aa25.71■■□□□ 1.71
CASC4-204ENST00000557945 GAKO14976 1311 aa25.71■■□□□ 1.71
CASC4-204ENST00000557945 ZNF532Q9HCE3 1301 aa25.71■■□□□ 1.71
CASC4-204ENST00000557945 MYO1BO43795 1136 aa25.7■■□□□ 1.71
CASC4-204ENST00000557945 ADD2P35612 726 aa25.7■■□□□ 1.71
CASC4-204ENST00000557945 MAST2Q6P0Q8 1798 aa25.7■■□□□ 1.71
CASC4-204ENST00000557945 ADAMTSL1Q8N6G6 1762 aa25.7■■□□□ 1.71
CASC4-204ENST00000557945 MYH2Q9UKX2 1941 aa25.7■■□□□ 1.7
CASC4-204ENST00000557945 CHGBP05060 677 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 BTDP43251 543 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 SLFNL1Q499Z3 407 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 APOBEC3HQ6NTF7 200 aaKnown RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 TMED8Q6PL24 325 aaPredicted RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 ADGRA1Q86SQ6 560 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 ZBED3Q96IU2 234 aaPredicted RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 TDRD3Q9H7E2 651 aaKnown RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 ASTN2O75129 1339 aaPredicted RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 RNF113AO15541 343 aaKnown RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 ZFYP08048 801 aaPredicted RBP25.69■■□□□ 1.7
CASC4-204ENST00000557945 SDSP20132 328 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 MIGA1Q8NAN2 632 aa25.69■■□□□ 1.7
CASC4-204ENST00000557945 GPR75-ASB3A0A0A6YYF3 556 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms