RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ATP5JP18859 108 aa31.18■■■□□ 2.58
SMAD6-202ENST00000557916 HDLBPQ00341 1268 aaKnown RBP31.18■■■□□ 2.58
SMAD6-202ENST00000557916 NBPF9Q3BBW0 867 aa31.18■■■□□ 2.58
SMAD6-202ENST00000557916 MTMR14Q8NCE2 650 aa31.18■■■□□ 2.58
SMAD6-202ENST00000557916 PGAP2Q9UHJ9 254 aa31.18■■■□□ 2.58
SMAD6-202ENST00000557916 WNT10BO00744 389 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 CYP2E1P05181 493 aaPredicted RBP31.17■■■□□ 2.58
SMAD6-202ENST00000557916 CRKP46108 304 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 ERICH6Q7L0X2 663 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 GPATCH3Q96I76 525 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 ZBED3Q96IU2 234 aaPredicted RBP31.17■■■□□ 2.58
SMAD6-202ENST00000557916 ECHDC1Q9NTX5 307 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 AKAP11Q9UKA4 1901 aa31.17■■■□□ 2.58
SMAD6-202ENST00000557916 MAP1SQ66K74 1059 aaPredicted RBP31.16■■■□□ 2.58
SMAD6-202ENST00000557916 TEKT1Q969V4 418 aa31.16■■■□□ 2.58
SMAD6-202ENST00000557916 MRIQ9BWK5 157 aa31.16■■■□□ 2.58
SMAD6-202ENST00000557916 PCDHAC2Q9Y5I4 1007 aa31.16■■■□□ 2.58
SMAD6-202ENST00000557916 NDUFB9Q9Y6M9 179 aa31.16■■■□□ 2.58
SMAD6-202ENST00000557916 NUCB1Q02818 461 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 OTUD7AQ8TE49 926 aaPredicted RBP31.15■■■□□ 2.58
SMAD6-202ENST00000557916 LRP2BPQ9P2M1 347 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 ASTN2O75129 1339 aaPredicted RBP31.15■■■□□ 2.58
SMAD6-202ENST00000557916 SPDYE2BA6NHP3 402 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 SPDYE6P0CI01 402 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 FSTL1Q12841 308 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 CHD1LQ86WJ1 897 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 DZIP1Q86YF9 867 aaKnown RBP31.15■■■□□ 2.58
SMAD6-202ENST00000557916 LNPKQ9C0E8 428 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 BOLA2Q9H3K6 86 aa31.15■■■□□ 2.58
SMAD6-202ENST00000557916 DIXDC1Q155Q3 683 aa31.14■■■□□ 2.58
SMAD6-202ENST00000557916 HHIPL2Q6UWX4 724 aa31.14■■■□□ 2.58
SMAD6-202ENST00000557916 PRMT6Q96LA8 375 aaPredicted RBP31.14■■■□□ 2.58
SMAD6-202ENST00000557916 RAI14Q9P0K7 980 aa31.14■■■□□ 2.58
SMAD6-202ENST00000557916 ANGEL2Q5VTE6 544 aaKnown RBP31.13■■■□□ 2.57
SMAD6-202ENST00000557916 CNTROBQ8N137 903 aa31.13■■■□□ 2.57
SMAD6-202ENST00000557916 DCPSQ96C86 337 aaKnown RBP31.13■■■□□ 2.57
SMAD6-202ENST00000557916 DNAJC2Q99543 621 aaKnown RBP31.13■■■□□ 2.57
SMAD6-202ENST00000557916 PIH1D3Q9NQM4 214 aaKnown RBP31.13■■■□□ 2.57
SMAD6-202ENST00000557916 GGA3Q9NZ52 723 aa31.13■■■□□ 2.57
SMAD6-202ENST00000557916 MECOMQ03112 1051 aa31.12■■■□□ 2.57
SMAD6-202ENST00000557916 TSHZ3Q63HK5 1081 aa31.12■■■□□ 2.57
SMAD6-202ENST00000557916 MX1P20591 662 aa31.11■■■□□ 2.57
SMAD6-202ENST00000557916 ZDHHC15Q96MV8 337 aa31.11■■■□□ 2.57
SMAD6-202ENST00000557916 HAUS7Q99871 368 aa31.11■■■□□ 2.57
SMAD6-202ENST00000557916 ANTXR1Q9H6X2 564 aa31.11■■■□□ 2.57
SMAD6-202ENST00000557916 TTC41PQ6P2S7 1318 aa31.11■■■□□ 2.57
SMAD6-202ENST00000557916 MYO1BO43795 1136 aa31.1■■■□□ 2.57
SMAD6-202ENST00000557916 SLF2Q8IX21 1173 aa31.1■■■□□ 2.57
SMAD6-202ENST00000557916 GOLIM4O00461 696 aa31.09■■■□□ 2.57
SMAD6-202ENST00000557916 C1QTNF8P60827 252 aa31.09■■■□□ 2.57
SMAD6-202ENST00000557916 TTF1Q15361 905 aaPredicted RBP31.09■■■□□ 2.57
SMAD6-202ENST00000557916 NSUN4Q96CB9 384 aaKnown RBP31.09■■■□□ 2.57
SMAD6-202ENST00000557916 SALL3Q9BXA9 1300 aa31.09■■■□□ 2.57
SMAD6-202ENST00000557916 PAG1Q9NWQ8 432 aa31.08■■■□□ 2.57
SMAD6-202ENST00000557916 DAGLAQ9Y4D2 1042 aa31.08■■■□□ 2.57
SMAD6-202ENST00000557916 ERC2O15083 957 aa31.07■■■□□ 2.57
SMAD6-202ENST00000557916 IDH1O75874 414 aaKnown RBP31.07■■■□□ 2.57
SMAD6-202ENST00000557916 ITGBL1O95965 494 aaPredicted RBP31.07■■■□□ 2.57
SMAD6-202ENST00000557916 GSTO1P78417 241 aa31.07■■■□□ 2.57
SMAD6-202ENST00000557916 APOBEC3HQ6NTF7 200 aaKnown RBP31.07■■■□□ 2.57
SMAD6-202ENST00000557916 CDC37L1Q7L3B6 337 aa31.07■■■□□ 2.57
SMAD6-202ENST00000557916 ZNF384Q8TF68 577 aa31.07■■■□□ 2.57
SMAD6-202ENST00000557916 GLIS2Q9BZE0 524 aaPredicted RBP31.07■■■□□ 2.57
SMAD6-202ENST00000557916 AOX1Q06278 1338 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 PITPNM2Q9BZ72 1349 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 IGSF3O75054 1194 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 KRT26Q7Z3Y9 468 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 USP48Q86UV5 1035 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 SULF1Q8IWU6 871 aa31.07■■■□□ 2.56
SMAD6-202ENST00000557916 EDC3Q96F86 508 aaKnown RBP31.07■■■□□ 2.56
SMAD6-202ENST00000557916 TDRD3Q9H7E2 651 aaKnown RBP31.07■■■□□ 2.56
SMAD6-202ENST00000557916 CLRN2A0PK11 232 aa31.06■■■□□ 2.56
SMAD6-202ENST00000557916 FAM163AQ96GL9 167 aaPredicted RBP31.06■■■□□ 2.56
SMAD6-202ENST00000557916 STAP2Q9UGK3 403 aa31.06■■■□□ 2.56
SMAD6-202ENST00000557916 GLRX3O76003 335 aaKnown RBP31.05■■■□□ 2.56
SMAD6-202ENST00000557916 LDHCP07864 332 aa31.05■■■□□ 2.56
SMAD6-202ENST00000557916 MAP3K12Q12852 859 aa31.05■■■□□ 2.56
SMAD6-202ENST00000557916 NAA16Q6N069 864 aaPredicted RBP31.05■■■□□ 2.56
SMAD6-202ENST00000557916 PI4K2BQ8TCG2 481 aa31.05■■■□□ 2.56
SMAD6-202ENST00000557916 ZNF70Q9UC06 446 aaPredicted RBP31.05■■■□□ 2.56
SMAD6-202ENST00000557916 GAKO14976 1311 aa31.05■■■□□ 2.56
SMAD6-202ENST00000557916 PDE1AP54750 535 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 SPDYE2Q495Y8 402 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 ERICH6BQ5W0A0 696 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 CCDC136Q96JN2 1154 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 VEZTQ9HBM0 779 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 SCAF8Q9UPN6 1271 aaKnown RBP31.04■■■□□ 2.56
SMAD6-202ENST00000557916 MROH7-TTC4A0A0A0MT08 1334 aa31.04■■■□□ 2.56
SMAD6-202ENST00000557916 ADM5C9JUS6 153 aa31.03■■■□□ 2.56
SMAD6-202ENST00000557916 APOBEC3FQ8IUX4 373 aaKnown RBP31.03■■■□□ 2.56
SMAD6-202ENST00000557916 TRAF5O00463 557 aa31.02■■■□□ 2.56
SMAD6-202ENST00000557916 PASKQ96RG2 1323 aa31.01■■■□□ 2.56
SMAD6-202ENST00000557916 MYH2Q9UKX2 1941 aa31.01■■■□□ 2.56
SMAD6-202ENST00000557916 CENPQQ7L2Z9 268 aaPredicted RBP31.01■■■□□ 2.55
SMAD6-202ENST00000557916 MYO5AQ9Y4I1 1855 aaKnown RBP31.01■■■□□ 2.55
SMAD6-202ENST00000557916 DLK2Q6UY11 383 aa31■■■□□ 2.55
SMAD6-202ENST00000557916 MAGEB6Q8N7X4 407 aa31■■■□□ 2.55
SMAD6-202ENST00000557916 POLR2AP24928 1970 aaKnown RBP31■■■□□ 2.55
SMAD6-202ENST00000557916 GPR75-ASB3A0A0A6YYF3 556 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 BTDP43251 543 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms