RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ADAMTSL1Q8N6G6 1762 aa11.17□□□□□ -0.62
CHD8-214ENST00000557727 ECE2O60344 883 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 IL1R1P14778 569 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 ADORA1P30542 326 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 CXCL9Q07325 125 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
CHD8-214ENST00000557727 LPIN2Q92539 896 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 ZNRF3Q9ULT6 936 aa11.16□□□□□ -0.62
CHD8-214ENST00000557727 DOCK2Q92608 1830 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 POTECB2RU33 542 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 HMMRO75330 724 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 IGHDP01880 384 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
CHD8-214ENST00000557727 GYG1P46976 350 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 TIMM10P62072 90 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 G3BP1Q13283 466 aaKnown RBP eCLIP11.15□□□□□ -0.627e-7■■□□□ 14.3
CHD8-214ENST00000557727 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 NIM1KQ8IY84 436 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 TDRD7Q8NHU6 1098 aaKnown RBP11.15□□□□□ -0.62
CHD8-214ENST00000557727 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
CHD8-214ENST00000557727 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
CHD8-214ENST00000557727 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
CHD8-214ENST00000557727 COA1Q9GZY4 146 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 GPR108Q9NPR9 543 aa11.15□□□□□ -0.62
CHD8-214ENST00000557727 A0A1B0GUL7 405 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 KCNJ4P48050 445 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 BCAMP50895 628 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 TNNI3KQ59H18 835 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
CHD8-214ENST00000557727 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
CHD8-214ENST00000557727 FPGT-TNNI3KV9GXZ4 949 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
CHD8-214ENST00000557727 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
CHD8-214ENST00000557727 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 PSMD14O00487 310 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 EVI5O60447 810 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 DDNO94850 711 aaPredicted RBP11.13□□□□□ -0.63
CHD8-214ENST00000557727 SLC5A1P13866 664 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 PTPREP23469 700 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 PHKA1P46020 1223 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 MFSD10Q14728 455 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 DACT2Q5SW24 774 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 JDP2Q8WYK2 163 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
CHD8-214ENST00000557727 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 GMLQ99445 158 aa11.13□□□□□ -0.63
CHD8-214ENST00000557727 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
CHD8-214ENST00000557727 FAM205AQ6ZU69 1335 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 MYH7P12883 1935 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 BHMG1C9JSJ3 638 aaPredicted RBP11.12□□□□□ -0.63
CHD8-214ENST00000557727 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 RAD17O75943 681 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
CHD8-214ENST00000557727 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
CHD8-214ENST00000557727 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
CHD8-214ENST00000557727 SCNN1DP51172 638 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 GPC2Q8N158 579 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 CERS5Q8N5B7 392 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 KIF1BPQ96EK5 621 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 MXD3Q9BW11 206 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
CHD8-214ENST00000557727 MYH2Q9UKX2 1941 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
CHD8-214ENST00000557727 YY1P25490 414 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 OS9Q13438 667 aaPredicted RBP11.11□□□□□ -0.63
CHD8-214ENST00000557727 SCARF1Q14162 830 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 ZNF804AQ7Z570 1209 aa11.11□□□□□ -0.63
CHD8-214ENST00000557727 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
CHD8-214ENST00000557727 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 APBB1O00213 710 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
CHD8-214ENST00000557727 EIF6P56537 245 aaKnown RBP11.1□□□□□ -0.63
CHD8-214ENST00000557727 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 GRIK5Q16478 980 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 STRIP1Q5VSL9 837 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 ZDHHC16Q969W1 377 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
CHD8-214ENST00000557727 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 IQSEC3Q9UPP2 1182 aaPredicted RBP11.1□□□□□ -0.63
CHD8-214ENST00000557727 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
CHD8-214ENST00000557727 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
CHD8-214ENST00000557727 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
CHD8-214ENST00000557727 MCAMP43121 646 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms