RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
SHMT2-234ENST00000557703 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
SHMT2-234ENST00000557703 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 WNT10BO00744 389 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 HIRAP54198 1017 aaPredicted RBP16.68■□□□□ 0.26
SHMT2-234ENST00000557703 SCARF1Q14162 830 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 TBC1D10BQ4KMP7 808 aaPredicted RBP16.68■□□□□ 0.26
SHMT2-234ENST00000557703 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
SHMT2-234ENST00000557703 ADAMTSL1Q8N6G6 1762 aa16.68■□□□□ 0.26
SHMT2-234ENST00000557703 IGHDP01880 384 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 CRKP46108 304 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-234ENST00000557703 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
SHMT2-234ENST00000557703 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 LRP2BPQ9P2M1 347 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
SHMT2-234ENST00000557703 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-234ENST00000557703 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-234ENST00000557703 PRDX5P30044 214 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 RBM5P52756 815 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHMT2-234ENST00000557703 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
SHMT2-234ENST00000557703 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
SHMT2-234ENST00000557703 SULF1Q8IWU6 871 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 HAUS7Q99871 368 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 JAG2Q9Y219 1238 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 PPP2R3BQ9Y5P8 575 aa16.66■□□□□ 0.26
SHMT2-234ENST00000557703 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-234ENST00000557703 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
SHMT2-234ENST00000557703 CYP2E1P05181 493 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-234ENST00000557703 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
SHMT2-234ENST00000557703 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
SHMT2-234ENST00000557703 AOX1Q06278 1338 aa16.65■□□□□ 0.26
SHMT2-234ENST00000557703 SHTN1A0MZ66 631 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 ITGBL1O95965 494 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-234ENST00000557703 EGFRP00533 1210 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 MX1P20591 662 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 ZAP70P43403 619 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 NBPF9Q3BBW0 867 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
SHMT2-234ENST00000557703 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-234ENST00000557703 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 RAI14Q9P0K7 980 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 GAKO14976 1311 aa16.64■□□□□ 0.25
SHMT2-234ENST00000557703 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 PLCG2P16885 1265 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 MECOMQ03112 1051 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
SHMT2-234ENST00000557703 KRT26Q7Z3Y9 468 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.251e-6■■□□□ 11.9
SHMT2-234ENST00000557703 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 GGA3Q9NZ52 723 aa16.63■□□□□ 0.25
SHMT2-234ENST00000557703 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
SHMT2-234ENST00000557703 BAG3O95817 575 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 TNNI2P48788 182 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 GRIK5Q16478 980 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 ANGEL2Q5VTE6 544 aaKnown RBP16.62■□□□□ 0.25
SHMT2-234ENST00000557703 PI16Q6UXB8 463 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-234ENST00000557703 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
SHMT2-234ENST00000557703 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 PASKQ96RG2 1323 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
SHMT2-234ENST00000557703 PPP4CP60510 307 aa16.61■□□□□ 0.25
SHMT2-234ENST00000557703 MAP1SQ66K74 1059 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-234ENST00000557703 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-234ENST00000557703 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
SHMT2-234ENST00000557703 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
SHMT2-234ENST00000557703 DAGLAQ9Y4D2 1042 aa16.61■□□□□ 0.25
SHMT2-234ENST00000557703 MROH7-TTC4A0A0A0MT08 1334 aa16.61■□□□□ 0.25
SHMT2-234ENST00000557703 ZFYP08048 801 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-234ENST00000557703 PDE1AP54750 535 aa16.6■□□□□ 0.25
SHMT2-234ENST00000557703 FKBP1BP68106 108 aa16.6■□□□□ 0.25
SHMT2-234ENST00000557703 TBC1D9Q6ZT07 1266 aa16.6■□□□□ 0.25
SHMT2-234ENST00000557703 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-234ENST00000557703 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
SHMT2-234ENST00000557703 MYH2Q9UKX2 1941 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 POLR2AP24928 1970 aaKnown RBP16.59■□□□□ 0.25
SHMT2-234ENST00000557703 IDH1O75874 414 aaKnown RBP16.59■□□□□ 0.25
SHMT2-234ENST00000557703 NF2P35240 595 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 APLP1P51693 650 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 SUPT20HL1Q3ZLR7 823 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 PI4K2BQ8TCG2 481 aa16.59■□□□□ 0.25
SHMT2-234ENST00000557703 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms