RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PDE3AQ14432 1141 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-223ENST00000557511 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 COG6Q9Y2V7 657 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 SCN4AP35499 1836 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-223ENST00000557511 RLBP1P12271 317 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-223ENST00000557511 IL1R1P14778 569 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 KLRK1P26718 216 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 GYG1P46976 350 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 ATP8B2P98198 1209 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 ATP2B3Q16720 1220 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 KIF4BQ2VIQ3 1234 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 GORABQ5T7V8 394 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
PSEN1-223ENST00000557511 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
PSEN1-223ENST00000557511 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
PSEN1-223ENST00000557511 PA2G4Q9UQ80 394 aaKnown RBP10.29□□□□□ -0.76
PSEN1-223ENST00000557511 LTBP1Q14766 1721 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 WTIPA6NIX2 430 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-223ENST00000557511 SNAP23O00161 211 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
PSEN1-223ENST00000557511 SASH1O94885 1247 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 MFSD10Q14728 455 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 TBC1D10BQ4KMP7 808 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-223ENST00000557511 HSP90AB4PQ58FF6 505 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
PSEN1-223ENST00000557511 PNMA6EA0A0J9YXQ4 647 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 MYO1BO43795 1136 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 FKBP1AP62942 108 aaKnown RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 CHAF1AQ13111 956 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 DACT2Q5SW24 774 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 ATG9AQ7Z3C6 839 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 VGLL2Q8N8G2 317 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 FAM84BQ96KN1 310 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-223ENST00000557511 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
PSEN1-223ENST00000557511 FGFR2P21802 821 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 BCAMP50895 628 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 TFCP2Q12800 502 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 DLGAP5Q15398 846 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 MFSD14BQ5SR56 506 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 FBXO33Q7Z6M2 555 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 SULF1Q8IWU6 871 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 TRPM4Q8TD43 1214 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 SSH3Q8TE77 659 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
PSEN1-223ENST00000557511 ZNF609O15014 1411 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 SEMA3EO15041 775 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 KRT26Q7Z3Y9 468 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 MXD3Q9BW11 206 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-223ENST00000557511 JAG2Q9Y219 1238 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 MAST3O60307 1309 aa10.25□□□□□ -0.77
PSEN1-223ENST00000557511 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 SCARF1Q14162 830 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
PSEN1-223ENST00000557511 GMLQ99445 158 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 ABT1Q9ULW3 272 aaKnown RBP10.24□□□□□ -0.77
PSEN1-223ENST00000557511 TTF2Q9UNY4 1162 aaKnown RBP10.24□□□□□ -0.77
PSEN1-223ENST00000557511 IRS2Q9Y4H2 1338 aa10.24□□□□□ -0.77
PSEN1-223ENST00000557511 NUDT7P0C024 238 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 NF2P35240 595 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 HIRAP54198 1017 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-223ENST00000557511 TIMM10P62072 90 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 ANGEL2Q5VTE6 544 aaKnown RBP10.23□□□□□ -0.77
PSEN1-223ENST00000557511 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
PSEN1-223ENST00000557511 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms