RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 GRM8O00222 908 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 CRKP46108 304 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 GTF2A2P52657 109 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
SNX6-209ENST00000557265 UBE4AQ14139 1066 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 TAF1CQ15572 869 aaPredicted RBP15.59■□□□□ 0.09
SNX6-209ENST00000557265 OTUD5Q96G74 571 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
SNX6-209ENST00000557265 PTCH2Q9Y6C5 1203 aa15.59■□□□□ 0.09
SNX6-209ENST00000557265 TNNI2P48788 182 aa15.58■□□□□ 0.08
SNX6-209ENST00000557265 SLC9C1Q4G0N8 1177 aa15.58■□□□□ 0.08
SNX6-209ENST00000557265 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
SNX6-209ENST00000557265 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
SNX6-209ENST00000557265 FAM43AQ8N2R8 423 aa15.58■□□□□ 0.08
SNX6-209ENST00000557265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNX6-209ENST00000557265 C9orf78Q9NZ63 289 aaPredicted RBP15.58■□□□□ 0.08
SNX6-209ENST00000557265 SALL2Q9Y467 1007 aaPredicted RBP15.58■□□□□ 0.08
SNX6-209ENST00000557265 CSADQ9Y600 493 aa15.58■□□□□ 0.08
SNX6-209ENST00000557265 MKI67P46013 3256 aaKnown RBP15.57■□□□□ 0.08
SNX6-209ENST00000557265 GRIK5Q16478 980 aa15.57■□□□□ 0.08
SNX6-209ENST00000557265 SLC4A8Q2Y0W8 1093 aa15.57■□□□□ 0.08
SNX6-209ENST00000557265 MYCP01106 439 aaPredicted RBP15.56■□□□□ 0.08
SNX6-209ENST00000557265 WDR63Q8IWG1 891 aa15.56■□□□□ 0.08
SNX6-209ENST00000557265 IQSEC3Q9UPP2 1182 aaPredicted RBP15.56■□□□□ 0.08
SNX6-209ENST00000557265 WDHD1O75717 1129 aaPredicted RBP15.55■□□□□ 0.08
SNX6-209ENST00000557265 FXR1P51114 621 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNX6-209ENST00000557265 CACNB3P54284 484 aa15.55■□□□□ 0.08
SNX6-209ENST00000557265 CHAF1AQ13111 956 aaPredicted RBP15.55■□□□□ 0.08
SNX6-209ENST00000557265 SLC4A10Q6U841 1118 aa15.55■□□□□ 0.08
SNX6-209ENST00000557265 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
SNX6-209ENST00000557265 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
SNX6-209ENST00000557265 SPDYE5A6NIY4 337 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 TLR2O60603 784 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 CETPP11597 493 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 ZKSCAN4Q969J2 545 aaPredicted RBP15.54■□□□□ 0.08
SNX6-209ENST00000557265 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 SUCLG2Q96I99 432 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 SRCIN1Q9C0H9 1055 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 COLQQ9Y215 455 aaPredicted RBP15.54■□□□□ 0.08
SNX6-209ENST00000557265 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
SNX6-209ENST00000557265 CENPFP49454 3210 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 MROH5Q6ZUA9 1318 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 BTBD19C9JJ37 291 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 IRF6O14896 467 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
SNX6-209ENST00000557265 LACTBP83111 547 aaPredicted RBP15.53■□□□□ 0.08
SNX6-209ENST00000557265 HDLBPQ00341 1268 aaKnown RBP15.53■□□□□ 0.08
SNX6-209ENST00000557265 KIF22Q14807 665 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 ERO1BQ86YB8 467 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
SNX6-209ENST00000557265 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
SNX6-209ENST00000557265 SNAPC2Q13487 334 aa15.52■□□□□ 0.08
SNX6-209ENST00000557265 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
SNX6-209ENST00000557265 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.08
SNX6-209ENST00000557265 H0YGN5 161 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
SNX6-209ENST00000557265 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
SNX6-209ENST00000557265 LRRC24Q50LG9 513 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 METTL24Q5JXM2 366 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
SNX6-209ENST00000557265 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 ZDHHC15Q96MV8 337 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 MRIQ9BWK5 157 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
SNX6-209ENST00000557265 TMOD2Q9NZR1 351 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 BRCA2P51587 3418 aa15.51■□□□□ 0.07
SNX6-209ENST00000557265 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 GNRH1P01148 92 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 BCAMP50895 628 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 PPIL2Q13356 520 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 FKBP1CQ5VVH2 108 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 FAM83AQ86UY5 434 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
SNX6-209ENST00000557265 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
SNX6-209ENST00000557265 LAMB1P07942 1786 aa15.49■□□□□ 0.07
SNX6-209ENST00000557265 MIGA2Q7L4E1 593 aa15.49■□□□□ 0.07
SNX6-209ENST00000557265 CEP290O15078 2479 aa15.49■□□□□ 0.07
SNX6-209ENST00000557265 UTYO14607 1347 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 PDE8BO95263 885 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 PRMT2P55345 433 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 RABL6Q3YEC7 729 aaPredicted RBP15.48■□□□□ 0.07
SNX6-209ENST00000557265 DCAF15Q66K64 600 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 C17orf99Q6UX52 265 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 ANKRD44Q8N8A2 993 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 VGLL2Q8N8G2 317 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 CPA4Q9UI42 421 aa15.48■□□□□ 0.07
SNX6-209ENST00000557265 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 RBBP6Q7Z6E9 1792 aaKnown RBP15.47■□□□□ 0.07
SNX6-209ENST00000557265 CTGFP29279 349 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 INPP5BP32019 993 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 PSMC4P43686 418 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 PPATQ06203 517 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 MTFR1Q15390 333 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms