RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 CTDNEP1O95476 244 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 RAD21O60216 631 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 UQCRFS1P1P0C7P4 283 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 HS1BP3Q53T59 392 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 LPIN2Q92539 896 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 GPR108Q9NPR9 543 aa17.81■□□□□ 0.44
TMEM55B-207ENST00000557041 FAM177A1Q8N128 213 aaPredicted RBP17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 UBE2Q2LH0YL09 131 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 ANO10Q9NW15 660 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 TBC1D10CQ8IV04 446 aa17.8■□□□□ 0.44
TMEM55B-207ENST00000557041 PES1O00541 588 aaKnown RBP17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 CDKL5O76039 1030 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 SERPINC1P01008 464 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 STX1AQ16623 288 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 LLPHQ9BRT6 129 aaKnown RBP17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 RIPOR2Q9Y4F9 1068 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 NDUFA8P51970 172 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 WTAPQ15007 396 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
TMEM55B-207ENST00000557041 CYP2D7A0A087X1C5 515 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 NRDCO43847 1150 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 KCNB2Q92953 911 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 AP5Z1O43299 807 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 ADD2P35612 726 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 ZNF274Q96GC6 653 aaPredicted RBP17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 HOMER1Q86YM7 354 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 GOLPH3LQ9H4A5 285 aa17.78■□□□□ 0.44
TMEM55B-207ENST00000557041 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 FAM160A1Q05DH4 1040 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 KRT40Q6A162 431 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 SYKP43405 635 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 IFNL3Q8IZI9 196 aa17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 CDC5LQ99459 802 aaKnown RBP17.77■□□□□ 0.44
TMEM55B-207ENST00000557041 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.43
TMEM55B-207ENST00000557041 ZPR1O75312 459 aa17.77■□□□□ 0.43
TMEM55B-207ENST00000557041 MYSM1Q5VVJ2 828 aa17.77■□□□□ 0.43
TMEM55B-207ENST00000557041 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 CHRNDQ07001 517 aa17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 ARID5BQ14865 1188 aa17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 CNNM3Q8NE01 707 aa17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 ZSWIM5Q9P217 1185 aa17.76■□□□□ 0.43
TMEM55B-207ENST00000557041 RTN1Q16799 776 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 LCORLQ8N3X6 602 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 ANO1Q5XXA6 986 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 TMC6Q7Z403 805 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 CAMTA1Q9Y6Y1 1673 aa17.75■□□□□ 0.43
TMEM55B-207ENST00000557041 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 KCNG4Q8TDN1 519 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 V9GYY5 206 aaPredicted RBP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 BTBD18B2RXH4 712 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 TNNT1P13805 278 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 CACNA1FO60840 1977 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 GNPATO15228 680 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 ZNF202O95125 648 aa17.74■□□□□ 0.43
TMEM55B-207ENST00000557041 ELP1O95163 1332 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 NEDD4P46934 1319 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 MAGEB6P1A0A0J9YX57 407 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 CTAGE5O15320 804 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 CDC27P30260 824 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 ZNF75DP51815 510 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 ANTXR2P58335 489 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms