RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 NBPF11Q86T75 865 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 HOOK2Q96ED9 719 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 CCL15-CCL14A0A0B4J2E2 113 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 KIF22Q14807 665 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 CCL15Q16663 113 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
CRX-203ENST00000556527 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
CRX-203ENST00000556527 ECM29Q5VYK3 1845 aa12.32□□□□□ -0.44
CRX-203ENST00000556527 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 TESPA1A2RU30 521 aaPredicted RBP12.31□□□□□ -0.44
CRX-203ENST00000556527 GJA5P36382 358 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 VGLL4Q14135 290 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 PTPN18Q99952 460 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
CRX-203ENST00000556527 MAST3O60307 1309 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 AOX1Q06278 1338 aa12.31□□□□□ -0.44
CRX-203ENST00000556527 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
CRX-203ENST00000556527 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
CRX-203ENST00000556527 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
CRX-203ENST00000556527 SLC4A8Q2Y0W8 1093 aa12.3□□□□□ -0.44
CRX-203ENST00000556527 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
CRX-203ENST00000556527 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
CRX-203ENST00000556527 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
CRX-203ENST00000556527 CETPP11597 493 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.29□□□□□ -0.44
CRX-203ENST00000556527 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 TEPSINQ96N21 525 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
CRX-203ENST00000556527 PDE8BO95263 885 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 CACNB3P54284 484 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 FBXO33Q7Z6M2 555 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 ERO1BQ86YB8 467 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.28□□□□□ -0.44
CRX-203ENST00000556527 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
CRX-203ENST00000556527 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
CRX-203ENST00000556527 SPDYE5A6NIY4 337 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
CRX-203ENST00000556527 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.45
CRX-203ENST00000556527 BCAMP50895 628 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
CRX-203ENST00000556527 LRRC24Q50LG9 513 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 FAM83AQ86UY5 434 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
CRX-203ENST00000556527 SLC5A1P13866 664 aa12.26□□□□□ -0.45
CRX-203ENST00000556527 RABL6Q3YEC7 729 aaPredicted RBP12.26□□□□□ -0.45
CRX-203ENST00000556527 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
CRX-203ENST00000556527 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
CRX-203ENST00000556527 ZCCHC17Q9NP64 241 aaKnown RBP12.26□□□□□ -0.45
CRX-203ENST00000556527 PTCH2Q9Y6C5 1203 aa12.26□□□□□ -0.45
CRX-203ENST00000556527 UTYO14607 1347 aa12.26□□□□□ -0.45
CRX-203ENST00000556527 PTPRCP08575 1304 aa12.26□□□□□ -0.45
CRX-203ENST00000556527 TLR2O60603 784 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 GNRH1P01148 92 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 PPIL2Q13356 520 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 GRIK5Q16478 980 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 HABP4Q5JVS0 413 aaKnown RBP12.25□□□□□ -0.45
CRX-203ENST00000556527 FKBP1CQ5VVH2 108 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 KAZALD1Q96I82 304 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 GNL3LQ9NVN8 582 aaKnown RBP12.25□□□□□ -0.45
CRX-203ENST00000556527 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
CRX-203ENST00000556527 IRF6O14896 467 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
CRX-203ENST00000556527 LAMB1P07942 1786 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 LACTBP83111 547 aaPredicted RBP12.24□□□□□ -0.45
CRX-203ENST00000556527 HHIPL2Q6UWX4 724 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 OTOFQ9HC10 1997 aa12.24□□□□□ -0.45
CRX-203ENST00000556527 HTTP42858 3142 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 HOXD10P28358 340 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 PRMT2P55345 433 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 PPATQ06203 517 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 TCP10Q12799 353 aa12.23□□□□□ -0.45
CRX-203ENST00000556527 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms