RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 NOS3P29474 1203 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 CDC25BP30305 580 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 USP5P45974 858 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 EHHADHQ08426 723 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 ZNF211Q13398 564 aaPredicted RBP5.45□□□□□ -1.54
TGFB3-205ENST00000556507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.45□□□□□ -1.54
TGFB3-205ENST00000556507 SPATA31E1Q6ZUB1 1445 aa5.45□□□□□ -1.54
TGFB3-205ENST00000556507 FZD6O60353 706 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 H2AFB1P0C5Y9 115 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 H2AFB2P0C5Z0 115 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 PTPRAP18433 802 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 FAM117BQ6P1L5 589 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 TXNDC11Q6PKC3 985 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 TMEM130Q8N3G9 435 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 POP1Q99575 1024 aaKnown RBP5.44□□□□□ -1.54
TGFB3-205ENST00000556507 SSBP4Q9BWG4 385 aaPredicted RBP5.44□□□□□ -1.54
TGFB3-205ENST00000556507 AKTIPQ9H8T0 292 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 SH2B1Q9NRF2 756 aaPredicted RBP5.44□□□□□ -1.54
TGFB3-205ENST00000556507 CNTLNQ9NXG0 1405 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 TEX14Q8IWB6 1497 aa5.44□□□□□ -1.54
TGFB3-205ENST00000556507 CROCC2H7BZ55 1655 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 NUP155O75694 1391 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 ARHGEF5Q12774 1597 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 C9orf84Q5VXU9 1444 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 PHACTR2O75167 634 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 TNFRSF21O75509 655 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 ALX3O95076 343 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 ACPPP15309 386 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 HNRNPMP52272 730 aaKnown RBP eCLIP5.43□□□□□ -1.54
TGFB3-205ENST00000556507 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 GALNT11Q8NCW6 608 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 CHRDQ9H2X0 955 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 PRKRIP1Q9H875 184 aaPredicted RBP5.43□□□□□ -1.54
TGFB3-205ENST00000556507 CCDC87Q9NVE4 849 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 DZANK1Q9NVP4 752 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 CDC42BPAQ5VT25 1732 aa5.43□□□□□ -1.54
TGFB3-205ENST00000556507 UHRF1BP1Q6BDS2 1440 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 F8W735 103 aaPredicted RBP5.42□□□□□ -1.54
TGFB3-205ENST00000556507 PDE2AO00408 941 aaPredicted RBP5.42□□□□□ -1.54
TGFB3-205ENST00000556507 FSCN2O14926 492 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 EREGO14944 169 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 ICMTO60725 284 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 TRPA1O75762 1119 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 EPHA1P21709 976 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 CD68P34810 354 aaPredicted RBP5.42□□□□□ -1.54
TGFB3-205ENST00000556507 SERPINB4P48594 390 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 CABP4P57796 275 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 PDE4CQ08493 712 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 PRSS36Q5K4E3 855 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 ZMYM1Q5SVZ6 1142 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 SNX29Q8TEQ0 813 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 MEGF10Q96KG7 1140 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 CARD10Q9BWT7 1032 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 ADAM19Q9H013 955 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 MBD5Q9P267 1494 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 KDM5DQ9BY66 1539 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 KIF7Q2M1P5 1343 aa5.42□□□□□ -1.54
TGFB3-205ENST00000556507 PLEKHH2Q8IVE3 1493 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 H3BRB1 525 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 NFKBIEO00221 500 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 EDN3P14138 238 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 HNRNPUQ00839 825 aaKnown RBP eCLIP5.41□□□□□ -1.54
TGFB3-205ENST00000556507 GLYCTKQ8IVS8 523 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 GJD3Q8N144 294 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 AGGF1Q8N302 714 aaeCLIP5.41□□□□□ -1.54
TGFB3-205ENST00000556507 KLHL23Q8NBE8 558 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 RETREG2Q8NC44 543 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 OSMRQ99650 979 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 TUT1Q9H6E5 874 aaKnown RBP5.41□□□□□ -1.54
TGFB3-205ENST00000556507 FOXD3Q9UJU5 478 aaPredicted RBP5.41□□□□□ -1.54
TGFB3-205ENST00000556507 BRPF3Q9ULD4 1205 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 ROCK2O75116 1388 aaKnown RBP5.41□□□□□ -1.54
TGFB3-205ENST00000556507 KIF15Q9NS87 1388 aa5.41□□□□□ -1.54
TGFB3-205ENST00000556507 CCDC141Q6ZP82 1450 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 ARHGEF12Q9NZN5 1544 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 H3BRJ5 948 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 FOXD4L6Q3SYB3 417 aaPredicted RBP5.4□□□□□ -1.54
TGFB3-205ENST00000556507 FOXD4L3Q6VB84 417 aaPredicted RBP5.4□□□□□ -1.54
TGFB3-205ENST00000556507 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.4□□□□□ -1.54
TGFB3-205ENST00000556507 DZIP1LQ8IYY4 767 aaKnown RBP5.4□□□□□ -1.54
TGFB3-205ENST00000556507 Q8N3U1 123 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
TGFB3-205ENST00000556507 HHIPQ96QV1 700 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 MRS2Q9HD23 443 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 SEC31BQ9NQW1 1179 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 KCNK4Q9NYG8 393 aa5.4□□□□□ -1.54
TGFB3-205ENST00000556507 SHROOM2Q13796 1616 aa5.4□□□□□ -1.55
TGFB3-205ENST00000556507 USP47Q96K76 1375 aa5.4□□□□□ -1.55
TGFB3-205ENST00000556507 MAST1Q9Y2H9 1570 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 GLB1P16278 677 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 PIP4K2BP78356 416 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 DUOXA2Q1HG44 320 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 EFCAB2Q5VUJ9 269 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 ACAD11Q709F0 780 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 WNT8BQ93098 351 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 NXPE3Q969Y0 559 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 KLHDC7BQ96G42 594 aa5.39□□□□□ -1.55
TGFB3-205ENST00000556507 ZKSCAN3Q9BRR0 538 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms