RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SNAP23O00161 211 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 TAF5LO75529 589 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 ZBTB48P10074 688 aaPredicted RBP13.73□□□□□ -0.21
CHGA-205ENST00000556098 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
CHGA-205ENST00000556098 INHBEP58166 350 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 SP3Q02447 781 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 NBPF12Q5TAG4 269 aaPredicted RBP13.73□□□□□ -0.21
CHGA-205ENST00000556098 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
CHGA-205ENST00000556098 CHRNDQ07001 517 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 SLC9C1Q4G0N8 1177 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 PCDHB15Q9Y5E8 787 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 CENPFP49454 3210 aa13.72□□□□□ -0.21
CHGA-205ENST00000556098 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 GNAI3P08754 354 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 GJA5P36382 358 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.21
CHGA-205ENST00000556098 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
CHGA-205ENST00000556098 SMC5Q8IY18 1101 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 CERS5Q8N5B7 392 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 OPTNQ96CV9 577 aa13.71□□□□□ -0.21
CHGA-205ENST00000556098 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
CHGA-205ENST00000556098 AOX1Q06278 1338 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 FXR1P51114 621 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHGA-205ENST00000556098 TAF1CQ15572 869 aaPredicted RBP13.7□□□□□ -0.22
CHGA-205ENST00000556098 G2E3Q7L622 706 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 ANKRD13AQ8IZ07 590 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 PRMT6Q96LA8 375 aaPredicted RBP13.7□□□□□ -0.22
CHGA-205ENST00000556098 PPP2R3BQ9Y5P8 575 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 PTCH2Q9Y6C5 1203 aa13.7□□□□□ -0.22
CHGA-205ENST00000556098 HMMRO75330 724 aa13.69□□□□□ -0.22
CHGA-205ENST00000556098 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
CHGA-205ENST00000556098 RASA3Q14644 834 aa13.69□□□□□ -0.22
CHGA-205ENST00000556098 TAF7LQ5H9L4 462 aa13.69□□□□□ -0.22
CHGA-205ENST00000556098 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
CHGA-205ENST00000556098 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
CHGA-205ENST00000556098 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 TCP10L2B9ZVM9 353 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 IGHDP01880 384 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 MMP14P50281 582 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 CAP1Q01518 475 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 PTPN18Q99952 460 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 HTTP42858 3142 aa13.68□□□□□ -0.22
CHGA-205ENST00000556098 MKI67P46013 3256 aaKnown RBP13.67□□□□□ -0.22
CHGA-205ENST00000556098 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
CHGA-205ENST00000556098 H7C1W4 665 aa13.67□□□□□ -0.22
CHGA-205ENST00000556098 CCL15Q16663 113 aa13.67□□□□□ -0.22
CHGA-205ENST00000556098 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
CHGA-205ENST00000556098 ZFYVE28Q9HCC9 887 aa13.67□□□□□ -0.22
CHGA-205ENST00000556098 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
CHGA-205ENST00000556098 GCKRQ14397 625 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 ZNF333Q96JL9 665 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 CNNM1Q9NRU3 951 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 TTF2Q9UNY4 1162 aaKnown RBP13.66□□□□□ -0.22
CHGA-205ENST00000556098 CSADQ9Y600 493 aa13.66□□□□□ -0.22
CHGA-205ENST00000556098 H0YGN5 161 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 WDHD1O75717 1129 aaPredicted RBP13.65□□□□□ -0.22
CHGA-205ENST00000556098 KIF22Q14807 665 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 MTMR14Q8NCE2 650 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 DNAAF4Q8WXU2 420 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 DPF3Q92784 378 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
CHGA-205ENST00000556098 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
CHGA-205ENST00000556098 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
CHGA-205ENST00000556098 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
CHGA-205ENST00000556098 GNAI2P04899 355 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 TNFAIP1Q13829 316 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 VGLL4Q14135 290 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 BRI3BPQ8WY22 251 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 ARHGAP39Q9C0H5 1083 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 TMEM39BQ9GZU3 492 aa13.64□□□□□ -0.23
CHGA-205ENST00000556098 DOCK2Q92608 1830 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 TNNI2P48788 182 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 GTF2A2P52657 109 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 CACNB3P54284 484 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
CHGA-205ENST00000556098 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
CHGA-205ENST00000556098 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
CHGA-205ENST00000556098 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
CHGA-205ENST00000556098 IL1R1P14778 569 aa13.62□□□□□ -0.23
CHGA-205ENST00000556098 GYG1P46976 350 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms