RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 NBPF15Q8N660 670 aa6.87□□□□□ -1.31
ATL1-208ENST00000556067 USP44Q9H0E7 712 aa6.87□□□□□ -1.31
ATL1-208ENST00000556067 CWC25Q9NXE8 425 aaPredicted RBP6.87□□□□□ -1.31
ATL1-208ENST00000556067 LRRFIP2Q9Y608 721 aaKnown RBP6.87□□□□□ -1.31
ATL1-208ENST00000556067 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 HSP90B1P14625 803 aaKnown RBP6.86□□□□□ -1.31
ATL1-208ENST00000556067 NUCB1Q02818 461 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
ATL1-208ENST00000556067 GCKRQ14397 625 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
ATL1-208ENST00000556067 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
ATL1-208ENST00000556067 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 CHD1LQ86WJ1 897 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 DCTPP1Q9H773 170 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 CCNL1Q9UK58 526 aaPredicted RBP6.86□□□□□ -1.31
ATL1-208ENST00000556067 ZNF652Q9Y2D9 606 aa6.86□□□□□ -1.31
ATL1-208ENST00000556067 IBTKQ9P2D0 1353 aaPredicted RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 DOT1LQ8TEK3 1739 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 TOGARAM1Q9Y4F4 1720 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 MAP3K15Q6ZN16 1313 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 ERVV-1B6SEH8 477 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 SURF6O75683 361 aaKnown RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 NBPF7P0C2Y1 421 aaPredicted RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 CRKLP46109 303 aaKnown RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 FAM182BQ5T319 152 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 C6orf118Q5T5N4 469 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 ERC1Q8IUD2 1116 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 KLF16Q9BXK1 252 aaPredicted RBP6.85□□□□□ -1.31
ATL1-208ENST00000556067 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 TMPRSS4Q9NRS4 437 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 ZBTB1Q9Y2K1 713 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 GLI3P10071 1580 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 LAMB4A4D0S4 1761 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 UBR2Q8IWV8 1755 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 KAT6BQ8WYB5 2073 aa6.85□□□□□ -1.31
ATL1-208ENST00000556067 C5P01031 1676 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 UTYO14607 1347 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 RAD21O60216 631 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 IGKV5-2P06315 115 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 DHX9Q08211 1270 aaKnown RBP6.84□□□□□ -1.31
ATL1-208ENST00000556067 G3BP1Q13283 466 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATL1-208ENST00000556067 IRF5Q13568 498 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 SCARF1Q14162 830 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 LRP10Q7Z4F1 713 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 TRIM46Q7Z4K8 759 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 PPP1R42Q7Z4L9 355 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 SIRT2Q8IXJ6 389 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 SSH3Q8TE77 659 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 POM121Q96HA1 1249 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 SLC4A9Q96Q91 983 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
ATL1-208ENST00000556067 LRRCC1Q9C099 1032 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 ITGB4P16144 1822 aa6.84□□□□□ -1.31
ATL1-208ENST00000556067 THSD7AQ9UPZ6 1657 aa6.84□□□□□ -1.32
ATL1-208ENST00000556067 CNTNAP4Q9C0A0 1308 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 ERVH48-1M5A8F1 160 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 UPP2O95045 317 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 EIF5P55010 431 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 CBLBQ13191 982 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 TRIM28Q13263 835 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 ITPK1Q13572 414 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 PARP10Q53GL7 1025 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 SLC27A3Q5K4L6 730 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 INTS5Q6P9B9 1019 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 UPF2Q9HAU5 1272 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 CHMP3Q9Y3E7 222 aa6.83□□□□□ -1.32
ATL1-208ENST00000556067 RTCBQ9Y3I0 505 aaKnown RBP6.83□□□□□ -1.32
ATL1-208ENST00000556067 PNMA6EA0A0J9YXQ4 647 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 H7C1W4 665 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 TRIM37O94972 964 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 PCCAP05165 728 aaPredicted RBP6.82□□□□□ -1.32
ATL1-208ENST00000556067 BMP2P12643 396 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 SNRPBP14678 240 aaKnown RBP6.82□□□□□ -1.32
ATL1-208ENST00000556067 GPTP24298 496 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
ATL1-208ENST00000556067 MTX1Q13505 466 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 TRAPPC3LQ5T215 181 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 GPATCH3Q96I76 525 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 SUCLG2Q96I99 432 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 ZFP42Q96MM3 310 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 ISCA1Q9BUE6 129 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 BICC1Q9H694 974 aaKnown RBP6.82□□□□□ -1.32
ATL1-208ENST00000556067 SENP2Q9HC62 589 aa6.82□□□□□ -1.32
ATL1-208ENST00000556067 TRMT112Q9UI30 125 aaKnown RBP6.82□□□□□ -1.32
ATL1-208ENST00000556067 EXOC6BQ9Y2D4 811 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms