RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 GTF3C2Q8WUA4 911 aaPredicted RBP6.58□□□□□ -1.36
PPP4R3A-209ENST00000555470 MRRFQ96E11 262 aaKnown RBP6.58□□□□□ -1.36
PPP4R3A-209ENST00000555470 CARNS1A5YM72 827 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 ADAM11O75078 769 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 MPSTP25325 297 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 HOXA10P31260 410 aaPredicted RBP6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 NLRP12P59046 1061 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 IKBKEQ14164 716 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 BEND4Q6ZU67 534 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 BSNDQ8WZ55 320 aa6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 KIAA1522Q9P206 1035 aaPredicted RBP6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 ANGEL1Q9UNK9 670 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-209ENST00000555470 MEGF11A6BM72 1044 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 PHACTR2O75167 634 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 FAM13AO94988 1023 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 NUTM2GQ5VZR2 741 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 DRC1Q96MC2 740 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 HHIPQ96QV1 700 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 OSMRQ99650 979 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 CYP4F12Q9HCS2 524 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 SOX13Q9UN79 622 aa6.56□□□□□ -1.36
PPP4R3A-209ENST00000555470 TRPA1O75762 1119 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 TXNDC2Q86VQ3 553 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 C8orf37Q96NL8 207 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 CCDC39Q9UFE4 941 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
PPP4R3A-209ENST00000555470 PRNPP04156 253 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 TCF3P15923 654 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 PREPP48147 710 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 SF3B2Q13435 895 aaKnown RBP6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 NFXL1Q6ZNB6 911 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 NXPE3Q969Y0 559 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 PIM2Q9P1W9 311 aa6.54□□□□□ -1.36
PPP4R3A-209ENST00000555470 FZD6O60353 706 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 RXRBP28702 533 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 ZNF648Q5T619 568 aaPredicted RBP6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 HGSNATQ68CP4 663 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 C12orf50Q8NA57 414 aaPredicted RBP6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 ASAP3Q8TDY4 903 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
PPP4R3A-209ENST00000555470 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 EREGO14944 169 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 NCLP19338 710 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 MAP4P27816 1152 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 COL19A1Q14993 1142 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 ZNF124Q15973 351 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 ZKSCAN3Q9BRR0 538 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 USP26Q9BXU7 913 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 ZFYVE1Q9HBF4 777 aa6.52□□□□□ -1.37
PPP4R3A-209ENST00000555470 SOX1O00570 391 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 USP11P51784 963 aa6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 FKBP4Q02790 459 aaKnown RBP eCLIP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 ECM1Q16610 540 aa6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 VSIG10LQ86VR7 867 aa6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 SMG8Q8ND04 991 aaKnown RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 BHLHE41Q9C0J9 482 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 LEMD3Q9Y2U8 911 aa6.51□□□□□ -1.37
PPP4R3A-209ENST00000555470 SMARCA5O60264 1052 aaPredicted RBP6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 VN1R5Q7Z5H4 357 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 BCL2L13Q9BXK5 485 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 OSBPL1AQ9BXW6 950 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 FOXD3Q9UJU5 478 aaPredicted RBP6.5□□□□□ -1.37
PPP4R3A-209ENST00000555470 NEFLP07196 543 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 GSTM4Q03013 218 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 NFKBIBQ15653 356 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 TP53INP2Q8IXH6 220 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 GJD3Q8N144 294 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 DDX54Q8TDD1 881 aaKnown RBP6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 METTL22Q9BUU2 404 aaPredicted RBP6.49□□□□□ -1.37
PPP4R3A-209ENST00000555470 LOC100289279A0A1B0GTE1 492 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 FAM95CA0A1B0GW59 222 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 ABL1P00519 1130 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 ESRRAP11474 423 aaPredicted RBP6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 FOSL1P15407 271 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 SGO2Q562F6 1265 aa6.48□□□□□ -1.37
PPP4R3A-209ENST00000555470 ANKRD13AQ8IZ07 590 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms