RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PDE3AQ14432 1141 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
SNX6-203ENST00000555416 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 GNL3LQ9NVN8 582 aaKnown RBP16.9■□□□□ 0.3
SNX6-203ENST00000555416 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
SNX6-203ENST00000555416 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
SNX6-203ENST00000555416 HSPA1AP0DMV8 641 aaKnown RBP16.89■□□□□ 0.29
SNX6-203ENST00000555416 HSPA1BP0DMV9 641 aaKnown RBP16.89■□□□□ 0.29
SNX6-203ENST00000555416 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
SNX6-203ENST00000555416 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 TLR7Q9NYK1 1049 aaKnown RBP16.89■□□□□ 0.29
SNX6-203ENST00000555416 DENND2AQ9ULE3 1009 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
SNX6-203ENST00000555416 SEMA3EO15041 775 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 CACNB3P54284 484 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
SNX6-203ENST00000555416 DIXDC1Q155Q3 683 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 APOBEC3HQ6NTF7 200 aaKnown RBP16.88■□□□□ 0.29
SNX6-203ENST00000555416 CDAN1Q8IWY9 1227 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 HHIPL1Q96JK4 782 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
SNX6-203ENST00000555416 FAM155AB1AL88 458 aaPredicted RBP16.87■□□□□ 0.29
SNX6-203ENST00000555416 UBE2Q2LH0YL09 131 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 PRKG1Q13976 671 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 GPR108Q9NPR9 543 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
SNX6-203ENST00000555416 TCP10L2B9ZVM9 353 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 MYO1BO43795 1136 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 RASA3Q14644 834 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 NBPF12Q5TAG4 269 aaPredicted RBP16.86■□□□□ 0.29
SNX6-203ENST00000555416 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
SNX6-203ENST00000555416 ZNF384Q8TF68 577 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
SNX6-203ENST00000555416 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
SNX6-203ENST00000555416 WBP1LQ9NX94 342 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
SNX6-203ENST00000555416 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
SNX6-203ENST00000555416 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
SNX6-203ENST00000555416 ECE1P42892 770 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 MCAMP43121 646 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 GORABQ5T7V8 394 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
SNX6-203ENST00000555416 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
SNX6-203ENST00000555416 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
SNX6-203ENST00000555416 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
SNX6-203ENST00000555416 FOXN1O15353 648 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 RRP1P56182 461 aaKnown RBP16.84■□□□□ 0.29
SNX6-203ENST00000555416 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 TEPSINQ96N21 525 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 MAST3O60307 1309 aa16.84■□□□□ 0.29
SNX6-203ENST00000555416 APBB1O00213 710 aa16.83■□□□□ 0.28
SNX6-203ENST00000555416 ZNF157P51786 506 aaPredicted RBP16.83■□□□□ 0.28
SNX6-203ENST00000555416 FKBP1BP68106 108 aa16.83■□□□□ 0.28
SNX6-203ENST00000555416 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
SNX6-203ENST00000555416 RASAL3Q86YV0 1011 aa16.83■□□□□ 0.28
SNX6-203ENST00000555416 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
SNX6-203ENST00000555416 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
SNX6-203ENST00000555416 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
SNX6-203ENST00000555416 SLC10A3P09131 477 aa16.82■□□□□ 0.28
SNX6-203ENST00000555416 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
SNX6-203ENST00000555416 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
SNX6-203ENST00000555416 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 NF2P35240 595 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 MAP2K2P36507 400 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 MECOMQ03112 1051 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 LDLRAD1Q5T700 205 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 AACSQ86V21 672 aa16.81■□□□□ 0.28
SNX6-203ENST00000555416 ANGEL1Q9UNK9 670 aaKnown RBP16.81■□□□□ 0.28
SNX6-203ENST00000555416 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
SNX6-203ENST00000555416 GAKO14976 1311 aa16.8■□□□□ 0.28
SNX6-203ENST00000555416 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
SNX6-203ENST00000555416 NFIAQ12857 509 aa16.8■□□□□ 0.28
SNX6-203ENST00000555416 ZGPATQ8N5A5 531 aaKnown RBP16.8■□□□□ 0.28
SNX6-203ENST00000555416 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
SNX6-203ENST00000555416 NDUFB9Q9Y6M9 179 aa16.8■□□□□ 0.28
SNX6-203ENST00000555416 HMMRO75330 724 aa16.79■□□□□ 0.28
SNX6-203ENST00000555416 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
SNX6-203ENST00000555416 CYP2E1P05181 493 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms