RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 RASSF7Q02833 373 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 DNM1Q05193 864 aaKnown RBP5.91□□□□□ -1.46
CPSF2-204ENST00000555244 EHHADHQ08426 723 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 SAMD5Q5TGI4 173 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 KRT28Q7Z3Y7 464 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 TMEM151AQ8N4L1 468 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 ZNF280CQ8ND82 737 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 NEDD1Q8NHV4 660 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 EDEM1Q92611 657 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 DMRTB1Q96MA1 342 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 CEP63Q96MT8 703 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 ASB16Q96NS5 453 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 SIN3AQ96ST3 1273 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 RBCK1Q9BYM8 510 aa5.91□□□□□ -1.46
CPSF2-204ENST00000555244 FNDC3AQ9Y2H6 1198 aaKnown RBP5.91□□□□□ -1.46
CPSF2-204ENST00000555244 ARHGEF28Q8N1W1 1705 aaKnown RBP5.91□□□□□ -1.46
CPSF2-204ENST00000555244 GSK3AP49840 483 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 ATCAYQ86WG3 371 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 RGL4Q8IZJ4 473 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 GPR152Q8TDT2 470 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 ACDQ96AP0 544 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 ENAMQ9NRM1 1142 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 DMGDHQ9UI17 866 aaKnown RBP5.9□□□□□ -1.46
CPSF2-204ENST00000555244 POLIQ9UNA4 740 aa5.9□□□□□ -1.46
CPSF2-204ENST00000555244 NSFL1CQ9UNZ2 370 aaKnown RBP5.9□□□□□ -1.46
CPSF2-204ENST00000555244 POLR3AO14802 1390 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-204ENST00000555244 BRD4O60885 1362 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-204ENST00000555244 TNS3Q68CZ2 1445 aa5.9□□□□□ -1.47
CPSF2-204ENST00000555244 ATP7BP35670 1465 aa5.9□□□□□ -1.47
CPSF2-204ENST00000555244 ANKRD33BA6NCL7 494 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-204ENST00000555244 PDGFAP04085 211 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 BCRP11274 1271 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 RXRBP28702 533 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 RBM6P78332 1123 aaKnown RBP5.89□□□□□ -1.47
CPSF2-204ENST00000555244 TYRO3Q06418 890 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 FAM26DQ5JW98 314 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 DNAJC14Q6Y2X3 702 aaPredicted RBP5.89□□□□□ -1.47
CPSF2-204ENST00000555244 NUDT16Q96DE0 195 aaKnown RBP5.89□□□□□ -1.47
CPSF2-204ENST00000555244 ABHD17AQ96GS6 310 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 ZCCHC2Q9C0B9 1178 aaKnown RBP5.89□□□□□ -1.47
CPSF2-204ENST00000555244 BRD7Q9NPI1 651 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 C11orf16Q9NQ32 467 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 PCDHGC4Q9Y5F7 938 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 AFF2P51816 1311 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 ARHGEF10O15013 1369 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 SBNO2Q9Y2G9 1366 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 ATRNO75882 1429 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 BCL9LQ86UU0 1499 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 SLIT2O94813 1529 aa5.89□□□□□ -1.47
CPSF2-204ENST00000555244 RGPD8O14715 1765 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 OPLAHO14841 1288 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 NEFLP07196 543 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 INPP5BP32019 993 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 LAMC2Q13753 1193 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 SAFB2Q14151 953 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 NBPF8Q3BBV2 869 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 C8orf34Q49A92 452 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 MEX3CQ5U5Q3 659 aaKnown RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 GJD3Q8N144 294 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CMTR1Q8N1G2 835 aaKnown RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 SCARF2Q96GP6 870 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 HIRIP3Q9BW71 556 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CDK19Q9BWU1 502 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CFHR5Q9BXR6 569 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 PHF24Q9UPV7 400 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CNTNAP5Q8WYK1 1306 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CLSPNQ9HAW4 1339 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 CENPJQ9HC77 1338 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
CPSF2-204ENST00000555244 TRPM3Q9HCF6 1732 aaPredicted RBP5.88□□□□□ -1.47
CPSF2-204ENST00000555244 FAM157BP0CG42 384 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-204ENST00000555244 COL19A1Q14993 1142 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 KLRG1Q96E93 195 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 OXCT2Q9BYC2 517 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-204ENST00000555244 BCL11AQ9H165 835 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 TRPC5Q9UL62 973 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-204ENST00000555244 RTCBQ9Y3I0 505 aaKnown RBP5.87□□□□□ -1.47
CPSF2-204ENST00000555244 ALS2Q96Q42 1657 aa5.87□□□□□ -1.47
CPSF2-204ENST00000555244 MARF1Q9Y4F3 1742 aaKnown RBP5.86□□□□□ -1.47
CPSF2-204ENST00000555244 TOPAZ1Q8N9V7 1692 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 SSH2Q76I76 1423 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 KHNYNO15037 678 aaKnown RBP5.86□□□□□ -1.47
CPSF2-204ENST00000555244 BNIP3LO60238 219 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 BMP4P12644 408 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 MAP2K3P46734 347 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 KCNQ4P56696 695 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 PLCB3Q01970 1234 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 NEUROD1Q13562 356 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 UBAP2LQ14157 1087 aaKnown RBP5.86□□□□□ -1.47
CPSF2-204ENST00000555244 UNC5CLQ8IV45 518 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 PMFBP1Q8TBY8 1022 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 FAM129BQ96TA1 746 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 USP21Q9UK80 565 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms