RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 PI16Q6UXB8 463 aa15.59■□□□□ 0.09
CHGA-203ENST00000553866 APOBEC3FQ8IUX4 373 aaKnown RBP15.59■□□□□ 0.09
CHGA-203ENST00000553866 HHIPL1Q96JK4 782 aa15.59■□□□□ 0.09
CHGA-203ENST00000553866 VEZTQ9HBM0 779 aa15.59■□□□□ 0.09
CHGA-203ENST00000553866 ZNF70Q9UC06 446 aaPredicted RBP15.59■□□□□ 0.09
CHGA-203ENST00000553866 AKAP2Q9Y2D5 859 aa15.59■□□□□ 0.09
CHGA-203ENST00000553866 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.09
CHGA-203ENST00000553866 PAPPA2Q9BXP8 1791 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 CDAN1Q8IWY9 1227 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 WDR66Q8TBY9 1149 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 DEFB129Q9H1M3 183 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 EXOC6BQ9Y2D4 811 aa15.58■□□□□ 0.08
CHGA-203ENST00000553866 FAM155AB1AL88 458 aaPredicted RBP15.57■□□□□ 0.08
CHGA-203ENST00000553866 UBE2Q2LH0YL09 131 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 FOXN1O15353 648 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 CACNB3P54284 484 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 OS9Q13438 667 aaPredicted RBP15.57■□□□□ 0.08
CHGA-203ENST00000553866 PRKG1Q13976 671 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 DIXDC1Q155Q3 683 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 TNNI3KQ59H18 835 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 APOBEC3HQ6NTF7 200 aaKnown RBP15.57■□□□□ 0.08
CHGA-203ENST00000553866 RGMBQ6NW40 437 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 GNL3LQ9NVN8 582 aaKnown RBP15.57■□□□□ 0.08
CHGA-203ENST00000553866 WBP1LQ9NX94 342 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 DENND2AQ9ULE3 1009 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 FPGT-TNNI3KV9GXZ4 949 aa15.57■□□□□ 0.08
CHGA-203ENST00000553866 SEMA3EO15041 775 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 ZBTB22O15209 634 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 MYO1BO43795 1136 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 ECE1P42892 770 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 HDLBPQ00341 1268 aaKnown RBP15.56■□□□□ 0.08
CHGA-203ENST00000553866 TEKT1Q969V4 418 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 DBNDD2Q9BQY9 259 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
CHGA-203ENST00000553866 HMG20BQ9P0W2 317 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 SUGT1Q9Y2Z0 365 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 SALL1Q9NSC2 1324 aa15.56■□□□□ 0.08
CHGA-203ENST00000553866 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
CHGA-203ENST00000553866 RASA3Q14644 834 aa15.55■□□□□ 0.08
CHGA-203ENST00000553866 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
CHGA-203ENST00000553866 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
CHGA-203ENST00000553866 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
CHGA-203ENST00000553866 GPR108Q9NPR9 543 aa15.55■□□□□ 0.08
CHGA-203ENST00000553866 LDHBP07195 334 aaKnown RBP15.54■□□□□ 0.08
CHGA-203ENST00000553866 ARID4AP29374 1257 aaPredicted RBP15.54■□□□□ 0.08
CHGA-203ENST00000553866 MCAMP43121 646 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 ZNF157P51786 506 aaPredicted RBP15.54■□□□□ 0.08
CHGA-203ENST00000553866 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 ZNF384Q8TF68 577 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 TEPSINQ96N21 525 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 CCDC8Q9H0W5 538 aaPredicted RBP15.54■□□□□ 0.08
CHGA-203ENST00000553866 DAGLAQ9Y4D2 1042 aa15.54■□□□□ 0.08
CHGA-203ENST00000553866 AKAP11Q9UKA4 1901 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 MAST3O60307 1309 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 PDS5AQ29RF7 1337 aaKnown RBP15.53■□□□□ 0.08
CHGA-203ENST00000553866 SLC10A3P09131 477 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 FKBP1BP68106 108 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 TTLL12Q14166 644 aaPredicted RBP15.53■□□□□ 0.08
CHGA-203ENST00000553866 GORABQ5T7V8 394 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 RASAL3Q86YV0 1011 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 RPAP2Q8IXW5 612 aaPredicted RBP15.53■□□□□ 0.08
CHGA-203ENST00000553866 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
CHGA-203ENST00000553866 TMEM39BQ9GZU3 492 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 ABCF2Q9UG63 623 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 DBNLQ9UJU6 430 aaKnown RBP15.53■□□□□ 0.08
CHGA-203ENST00000553866 PPP2R3BQ9Y5P8 575 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 MYH2Q9UKX2 1941 aa15.53■□□□□ 0.08
CHGA-203ENST00000553866 APBB1O00213 710 aa15.52■□□□□ 0.08
CHGA-203ENST00000553866 MAP2K2P36507 400 aa15.52■□□□□ 0.08
CHGA-203ENST00000553866 COL13A1Q5TAT6 717 aaPredicted RBP15.52■□□□□ 0.08
CHGA-203ENST00000553866 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
CHGA-203ENST00000553866 SNRKQ9NRH2 765 aa15.52■□□□□ 0.08
CHGA-203ENST00000553866 ANGEL1Q9UNK9 670 aaKnown RBP15.52■□□□□ 0.08
CHGA-203ENST00000553866 MYO5AQ9Y4I1 1855 aaKnown RBP15.51■□□□□ 0.07
CHGA-203ENST00000553866 NF2P35240 595 aa15.51■□□□□ 0.07
CHGA-203ENST00000553866 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
CHGA-203ENST00000553866 KIF23Q02241 960 aaPredicted RBP15.51■□□□□ 0.07
CHGA-203ENST00000553866 LDLRAD1Q5T700 205 aa15.51■□□□□ 0.07
CHGA-203ENST00000553866 CDC42EP5Q6NZY7 148 aa15.51■□□□□ 0.07
CHGA-203ENST00000553866 IL1RAPL2Q9NP60 686 aa15.51■□□□□ 0.07
CHGA-203ENST00000553866 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
CHGA-203ENST00000553866 MAP2K1Q02750 393 aaPredicted RBP15.5■□□□□ 0.07
CHGA-203ENST00000553866 MECOMQ03112 1051 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 NFIAQ12857 509 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 NOGQ13253 232 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 TTC39AQ5SRH9 613 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 RHPN1Q8TCX5 695 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 CCDC102AQ96A19 550 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 CLMNQ96JQ2 1002 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
CHGA-203ENST00000553866 TSKSQ9UJT2 592 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 NDUFB9Q9Y6M9 179 aa15.5■□□□□ 0.07
CHGA-203ENST00000553866 GAKO14976 1311 aa15.49■□□□□ 0.07
CHGA-203ENST00000553866 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
CHGA-203ENST00000553866 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms