RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
ATXN3-223ENST00000553686 ADAMTS13Q76LX8 1427 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 ALBP02768 609 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 VPS72Q15906 364 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 PCSK7Q16549 785 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 NBPF8Q3BBV2 869 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 RPRD2Q5VT52 1461 aaKnown RBP9.14□□□□□ -0.95
ATXN3-223ENST00000553686 RALGAPBQ86X10 1494 aa9.14□□□□□ -0.95
ATXN3-223ENST00000553686 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-223ENST00000553686 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 ZBTB42B2RXF5 422 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 COL8A1P27658 744 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 PDE4CQ08493 712 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
ATXN3-223ENST00000553686 C20orf204Q6ZNR8 217 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 ATCAYQ86WG3 371 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
ATXN3-223ENST00000553686 FNDC3AQ9Y2H6 1198 aaKnown RBP9.13□□□□□ -0.95
ATXN3-223ENST00000553686 DUOX2Q9NRD8 1548 aa9.13□□□□□ -0.95
ATXN3-223ENST00000553686 NINLQ9Y2I6 1382 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 ARHGEF5Q12774 1597 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-223ENST00000553686 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-223ENST00000553686 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-223ENST00000553686 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 NUDT8Q8WV74 236 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 TRIM11Q96F44 468 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 ERBINQ96RT1 1412 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
ATXN3-223ENST00000553686 UNC13BO14795 1591 aa9.12□□□□□ -0.95
ATXN3-223ENST00000553686 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 KCNQ2O43526 872 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 MMP20O60882 483 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 LILRB5O75023 590 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 ABL1P00519 1130 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 CPB1P15086 417 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 PSAPL1Q6NUJ1 521 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 PRDM6Q9NQX0 595 aa9.11□□□□□ -0.95
ATXN3-223ENST00000553686 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
ATXN3-223ENST00000553686 PSAPP07602 524 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 MPSTP25325 297 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 EIF1AXP47813 144 aaKnown RBP9.1□□□□□ -0.95
ATXN3-223ENST00000553686 FKBP4Q02790 459 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-223ENST00000553686 AAMPQ13685 434 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
ATXN3-223ENST00000553686 HFE2Q6ZVN8 426 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
ATXN3-223ENST00000553686 ANO2Q9NQ90 1003 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 PTPRUQ92729 1446 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
ATXN3-223ENST00000553686 MYOM2P54296 1465 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 RGS9O75916 674 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 NRLP54845 237 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 GPLD1P80108 840 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 COL9A3Q14050 684 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 ALYREFQ86V81 257 aaKnown RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 EDEM1Q92611 657 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 JPH1Q9HDC5 661 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 NAGPAQ9UK23 515 aa9.09□□□□□ -0.95
ATXN3-223ENST00000553686 CHD2O14647 1828 aaKnown RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
ATXN3-223ENST00000553686 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 J3QW42 95 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 FAM13AO94988 1023 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 SIK1P57059 783 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 PLAURQ03405 335 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-223ENST00000553686 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 ELMSAN1Q6PJG2 1045 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 LMTK2Q8IWU2 1503 aa9.08□□□□□ -0.96
ATXN3-223ENST00000553686 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 TRPM2O94759 1503 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 APBA3O96018 575 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
ATXN3-223ENST00000553686 PCSK2P16519 638 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 NPR3P17342 541 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 PARD3Q8TEW0 1356 aa9.07□□□□□ -0.96
ATXN3-223ENST00000553686 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 SLIT2O94813 1529 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 NID1P14543 1247 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-223ENST00000553686 ZNF211Q13398 564 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms