RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 C17orf99Q6UX52 265 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 TDRD3Q9H7E2 651 aaKnown RBP17.78■□□□□ 0.44
PRPF39-204ENST00000553605 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 BIN2Q9UBW5 565 aaPredicted RBP17.78■□□□□ 0.44
PRPF39-204ENST00000553605 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
PRPF39-204ENST00000553605 MYH3P11055 1940 aa17.77■□□□□ 0.44
PRPF39-204ENST00000553605 UBXN2AP68543 259 aa17.77■□□□□ 0.44
PRPF39-204ENST00000553605 GPR153Q6NV75 609 aa17.77■□□□□ 0.44
PRPF39-204ENST00000553605 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
PRPF39-204ENST00000553605 U2AF1L4Q8WU68 220 aaKnown RBP17.77■□□□□ 0.44
PRPF39-204ENST00000553605 JAG2Q9Y219 1238 aa17.77■□□□□ 0.44
PRPF39-204ENST00000553605 FMNL1O95466 1100 aaPredicted RBP17.76■□□□□ 0.43
PRPF39-204ENST00000553605 SNAPC2Q13487 334 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 ZNF804AQ7Z570 1209 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 CPA4Q9UI42 421 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 STXBP5LQ9Y2K9 1186 aa17.76■□□□□ 0.43
PRPF39-204ENST00000553605 MYPNQ86TC9 1320 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 TAF5LO75529 589 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 TNNI2P48788 182 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
PRPF39-204ENST00000553605 COL25A1Q9BXS0 654 aaPredicted RBP17.75■□□□□ 0.43
PRPF39-204ENST00000553605 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 H7C1W4 665 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 IRF6O14896 467 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 SGPL1O95470 568 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 CWF19L2Q2TBE0 894 aaKnown RBP17.74■□□□□ 0.43
PRPF39-204ENST00000553605 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
PRPF39-204ENST00000553605 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
PRPF39-204ENST00000553605 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
PRPF39-204ENST00000553605 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
PRPF39-204ENST00000553605 TTF2Q9UNY4 1162 aaKnown RBP17.73■□□□□ 0.43
PRPF39-204ENST00000553605 NEURL1BA8MQ27 555 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 CSF1RP07333 972 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 BMP8BP34820 402 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 PPIL2Q13356 520 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 Q7L0L9 218 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 ZKSCAN4Q969J2 545 aaPredicted RBP17.72■□□□□ 0.43
PRPF39-204ENST00000553605 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
PRPF39-204ENST00000553605 TFRCP02786 760 aaKnown RBP17.71■□□□□ 0.43
PRPF39-204ENST00000553605 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
PRPF39-204ENST00000553605 SLAIN1Q8ND83 568 aa17.71■□□□□ 0.43
PRPF39-204ENST00000553605 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
PRPF39-204ENST00000553605 GDF15Q99988 308 aa17.71■□□□□ 0.43
PRPF39-204ENST00000553605 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 PDHXO00330 501 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 CAPN2P17655 700 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 PRKCZQ05513 592 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 ANKRD23Q86SG2 305 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 MTMR10Q9NXD2 777 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
PRPF39-204ENST00000553605 PPATQ06203 517 aa17.69■□□□□ 0.42
PRPF39-204ENST00000553605 CRKP46108 304 aa17.68■□□□□ 0.42
PRPF39-204ENST00000553605 FCGRTP55899 365 aa17.68■□□□□ 0.42
PRPF39-204ENST00000553605 LRIT3Q3SXY7 679 aa17.68■□□□□ 0.42
PRPF39-204ENST00000553605 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
PRPF39-204ENST00000553605 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
PRPF39-204ENST00000553605 ADGRA2Q96PE1 1338 aa17.68■□□□□ 0.42
PRPF39-204ENST00000553605 ARAP2Q8WZ64 1704 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 CASP7P55210 303 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 GNAI1P63096 354 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 GCKRQ14397 625 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 PAWRQ96IZ0 340 aaKnown RBP17.67■□□□□ 0.42
PRPF39-204ENST00000553605 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 GABRQQ9UN88 632 aa17.67■□□□□ 0.42
PRPF39-204ENST00000553605 ADCY3O60266 1144 aa17.66■□□□□ 0.42
PRPF39-204ENST00000553605 BCAMP50895 628 aa17.66■□□□□ 0.42
PRPF39-204ENST00000553605 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRPF39-204ENST00000553605 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
PRPF39-204ENST00000553605 HOOK2Q96ED9 719 aa17.66■□□□□ 0.42
PRPF39-204ENST00000553605 PLIN1O60240 522 aa17.65■□□□□ 0.42
PRPF39-204ENST00000553605 INHAP05111 366 aa17.65■□□□□ 0.42
PRPF39-204ENST00000553605 CACNB3P54284 484 aa17.65■□□□□ 0.42
PRPF39-204ENST00000553605 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
PRPF39-204ENST00000553605 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
PRPF39-204ENST00000553605 BCRP11274 1271 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 ELNP15502 786 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 DCAF15Q66K64 600 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 PXYLP1Q8TE99 480 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
PRPF39-204ENST00000553605 ZMYND8Q9ULU4 1186 aaPredicted RBP17.64■□□□□ 0.41
PRPF39-204ENST00000553605 HIBADHP31937 336 aaKnown RBP17.63■□□□□ 0.41
PRPF39-204ENST00000553605 FLT3LGP49771 235 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
PRPF39-204ENST00000553605 MOGSQ13724 837 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRPF39-204ENST00000553605 RALBP1Q15311 655 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms