RNA–Protein interactions for RNA: ENST00000553571.5

NSFL1C-210, Transcript of NSFL1 cofactor, humanhuman

TSL 4

Gene NSFL1C, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-210ENST00000553571 FKTNO75072 461 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 CRKP46108 304 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 TNNI2P48788 182 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 RBM5P52756 815 aaKnown RBP eCLIP12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 PRKG1Q13976 671 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 ZNF70Q9UC06 446 aaPredicted RBP12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
NSFL1C-210ENST00000553571 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 ZBTB22O15209 634 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 USP2O75604 605 aaPredicted RBP12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 PUM3Q15397 648 aaKnown RBP12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
NSFL1C-210ENST00000553571 FGFR2P21802 821 aa12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 FAM83AQ86UY5 434 aa12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 TRMT2AQ8IZ69 625 aaKnown RBP12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 TEKT1Q969V4 418 aa12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 ZDHHC15Q96MV8 337 aa12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 TDRD3Q9H7E2 651 aaKnown RBP12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
NSFL1C-210ENST00000553571 PTPRFP10586 1907 aa12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 EYA2O00167 538 aa12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 IFIT1P09914 478 aaKnown RBP12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 RFX5P48382 616 aaPredicted RBP12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 HOOK2Q96ED9 719 aa12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 FZD1Q9UP38 647 aa12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
NSFL1C-210ENST00000553571 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 GJA5P36382 358 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 SOX10P56693 466 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 HHIPL2Q6UWX4 724 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 LPIN2Q92539 896 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
NSFL1C-210ENST00000553571 CIAO1O76071 339 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 SLC5A1P13866 664 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 OPTNQ96CV9 577 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 CSADQ9Y600 493 aa12.43□□□□□ -0.42
NSFL1C-210ENST00000553571 MGAMO43451 1857 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 TCP10L2B9ZVM9 353 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 BCAMP50895 628 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 GTF2A2P52657 109 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 CRHR2Q13324 411 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 VGLL4Q14135 290 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 GRIK5Q16478 980 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 TMEM39BQ9GZU3 492 aa12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
NSFL1C-210ENST00000553571 SALL1Q9NSC2 1324 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 SEMA3EO15041 775 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 CEP290O15078 2479 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 PTPN18Q99952 460 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 API5Q9BZZ5 524 aaKnown RBP12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
NSFL1C-210ENST00000553571 PDS5AQ29RF7 1337 aaKnown RBP12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 SP3Q02447 781 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 ERO1BQ86YB8 467 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
NSFL1C-210ENST00000553571 IL15P40933 162 aaPredicted RBP12.39□□□□□ -0.43
NSFL1C-210ENST00000553571 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
NSFL1C-210ENST00000553571 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms