RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CSADQ9Y600 493 aa14.95□□□□□ -0.02
SRP54-203ENST00000553544 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
SRP54-203ENST00000553544 AOX1Q06278 1338 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 BRCA2P51587 3418 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 H0YGN5 161 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 MYCP01106 439 aaPredicted RBP14.94□□□□□ -0.02
SRP54-203ENST00000553544 TNNI2P48788 182 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 LDHAL6AQ6ZMR3 332 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 TTF2Q9UNY4 1162 aaKnown RBP14.94□□□□□ -0.02
SRP54-203ENST00000553544 CEP290O15078 2479 aa14.94□□□□□ -0.02
SRP54-203ENST00000553544 FAM205AQ6ZU69 1335 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 E9PSI1 815 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 GNRH1P01148 92 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 FOXO4P98177 505 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 SLFN5Q08AF3 891 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 CCDC57Q2TAC2 916 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 BEND3Q5T5X7 828 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
SRP54-203ENST00000553544 TEPSINQ96N21 525 aa14.93□□□□□ -0.02
SRP54-203ENST00000553544 TCP10L2B9ZVM9 353 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 F6X3S4 739 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 TLR2O60603 784 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 CETPP11597 493 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 HIBADHP31937 336 aaKnown RBP14.92□□□□□ -0.02
SRP54-203ENST00000553544 VGLL4Q14135 290 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 TDRD7Q8NHU6 1098 aaKnown RBP14.92□□□□□ -0.02
SRP54-203ENST00000553544 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 CNNM1Q9NRU3 951 aa14.92□□□□□ -0.02
SRP54-203ENST00000553544 ZNF646O15015 1829 aaPredicted RBP14.92□□□□□ -0.02
SRP54-203ENST00000553544 PRMT2P55345 433 aa14.91□□□□□ -0.02
SRP54-203ENST00000553544 LMBR1LQ6UX01 489 aa14.91□□□□□ -0.02
SRP54-203ENST00000553544 TRMT2AQ8IZ69 625 aaKnown RBP14.91□□□□□ -0.02
SRP54-203ENST00000553544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.91□□□□□ -0.02
SRP54-203ENST00000553544 SH3TC2Q8TF17 1288 aa14.91□□□□□ -0.02
SRP54-203ENST00000553544 DPF3Q92784 378 aa14.91□□□□□ -0.02
SRP54-203ENST00000553544 TMEM39BQ9GZU3 492 aa14.91□□□□□ -0.02
SRP54-203ENST00000553544 ZCCHC17Q9NP64 241 aaKnown RBP14.91□□□□□ -0.02
SRP54-203ENST00000553544 CRKP46108 304 aa14.9□□□□□ -0.02
SRP54-203ENST00000553544 LACTBP83111 547 aaPredicted RBP14.9□□□□□ -0.02
SRP54-203ENST00000553544 UBE4AQ14139 1066 aa14.9□□□□□ -0.02
SRP54-203ENST00000553544 CDCA7LQ96GN5 454 aa14.9□□□□□ -0.02
SRP54-203ENST00000553544 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
SRP54-203ENST00000553544 TRIOBPQ9H2D6 2365 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 SNAPC2Q13487 334 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 ERO1BQ86YB8 467 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 CDAN1Q8IWY9 1227 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 MRPL50Q8N5N7 158 aaKnown RBP14.89□□□□□ -0.03
SRP54-203ENST00000553544 HOOK2Q96ED9 719 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 FAM84BQ96KN1 310 aaPredicted RBP14.89□□□□□ -0.03
SRP54-203ENST00000553544 ARHGAP39Q9C0H5 1083 aa14.89□□□□□ -0.03
SRP54-203ENST00000553544 RBBP6Q7Z6E9 1792 aaKnown RBP14.88□□□□□ -0.03
SRP54-203ENST00000553544 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
SRP54-203ENST00000553544 HOXD10P28358 340 aa14.88□□□□□ -0.03
SRP54-203ENST00000553544 GYG1P46976 350 aa14.88□□□□□ -0.03
SRP54-203ENST00000553544 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
SRP54-203ENST00000553544 NKX2-3Q8TAU0 364 aa14.88□□□□□ -0.03
SRP54-203ENST00000553544 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
SRP54-203ENST00000553544 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
SRP54-203ENST00000553544 VPS37DQ86XT2 251 aa14.87□□□□□ -0.03
SRP54-203ENST00000553544 GRM8O00222 908 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 IRF6O14896 467 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 PSMC4P43686 418 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 EPHA10Q5JZY3 1008 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 ZKSCAN4Q969J2 545 aaPredicted RBP14.86□□□□□ -0.03
SRP54-203ENST00000553544 WRNIP1Q96S55 665 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 MRIQ9BWK5 157 aa14.86□□□□□ -0.03
SRP54-203ENST00000553544 C9orf78Q9NZ63 289 aaPredicted RBP14.86□□□□□ -0.03
SRP54-203ENST00000553544 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
SRP54-203ENST00000553544 FRAT2O75474 233 aaPredicted RBP14.85□□□□□ -0.03
SRP54-203ENST00000553544 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
SRP54-203ENST00000553544 PPIL2Q13356 520 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 MTFR1Q15390 333 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 ALDH1L2Q3SY69 923 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 C17orf99Q6UX52 265 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 FAM83AQ86UY5 434 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 RAET1EQ8TD07 263 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 HTATIP2Q9BUP3 242 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 SRCIN1Q9C0H9 1055 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 TMOD2Q9NZR1 351 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 SRRDQ9UH36 339 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 SZT2Q5T011 3432 aa14.85□□□□□ -0.03
SRP54-203ENST00000553544 LAMB1P07942 1786 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 GRK4P32298 578 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 CACNB3P54284 484 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 PPATQ06203 517 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 CAVIN4Q5BKX8 364 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 FKBP1CQ5VVH2 108 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
SRP54-203ENST00000553544 FBXO33Q7Z6M2 555 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms