RNA–Protein interactions for RNA: ENST00000553314.1

TIMELESS-202, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-202ENST00000553314 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 ADCY3O60266 1144 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 FCGRTP55899 365 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 MDM2Q00987 491 aaPredicted RBP9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 SNAPC2Q13487 334 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 TNFAIP1Q13829 316 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 KRT24Q2M2I5 525 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 C17orf99Q6UX52 265 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 CERS5Q8N5B7 392 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 ZBTB38Q8NAP3 1195 aaPredicted RBP9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 SNX27Q96L92 541 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 GABRQQ9UN88 632 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 ADGRA2Q96PE1 1338 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 MAPK8IP3Q9UPT6 1336 aa9.47□□□□□ -0.89
TIMELESS-202ENST00000553314 TCP10L2B9ZVM9 353 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 PDHXO00330 501 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 IRF6O14896 467 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 WRNIP1Q96S55 665 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 CDX2Q99626 313 aaPredicted RBP9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 MYD88Q99836 296 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 TMEM39BQ9GZU3 492 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 MINPP1Q9UNW1 487 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 SNCAIPQ9Y6H5 919 aa9.46□□□□□ -0.9
TIMELESS-202ENST00000553314 PDE8AO60658 829 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 PXYLP1Q8TE99 480 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 ZKSCAN4Q969J2 545 aaPredicted RBP9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 GREM2Q9H772 168 aa9.45□□□□□ -0.9
TIMELESS-202ENST00000553314 FOSL2P15408 326 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 FLT3LGP49771 235 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 CTSWP56202 376 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 GOLGA2Q08379 1002 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 ERO1BQ86YB8 467 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 PARK7Q99497 189 aaKnown RBP9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 CRISPLD2Q9H0B8 497 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 C11orf49Q9H6J7 331 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 TDRD3Q9H7E2 651 aaKnown RBP9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 PAK6Q9NQU5 681 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 SPEF2Q9C093 1822 aa9.44□□□□□ -0.9
TIMELESS-202ENST00000553314 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 TNPO2O14787 897 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 CYP2C8P10632 490 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 PPP2R1AP30153 589 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 TNNI2P48788 182 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 PPIL2Q13356 520 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 CD209Q9NNX6 404 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 LAS1LQ9Y4W2 734 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
TIMELESS-202ENST00000553314 PCCAP05165 728 aaPredicted RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 IGHMBP2P38935 993 aaKnown RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 CACNB3P54284 484 aa9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 ANKRD23Q86SG2 305 aa9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 CWC25Q9NXE8 425 aaPredicted RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 DBF4Q9UBU7 674 aaPredicted RBP9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 LEMD3Q9Y2U8 911 aa9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 ECM29Q5VYK3 1845 aa9.42□□□□□ -0.9
TIMELESS-202ENST00000553314 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 SNAP23O00161 211 aa9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 TRIM28Q13263 835 aaKnown RBP9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
TIMELESS-202ENST00000553314 DDX60LQ5H9U9 1706 aaKnown RBP9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 BCRP11274 1271 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 IRF5Q13568 498 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 HOOK2Q96ED9 719 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 HYPKQ9NX55 129 aa9.4□□□□□ -0.9
TIMELESS-202ENST00000553314 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.91
TIMELESS-202ENST00000553314 TAF5LO75529 589 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 INPP5BP32019 993 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 RIPK4P57078 832 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 USP38Q8NB14 1042 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 CCDC191Q8NCU4 936 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 TTLL11Q8NHH1 800 aa9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 SMCR8Q8TEV9 937 aaPredicted RBP9.39□□□□□ -0.91
TIMELESS-202ENST00000553314 PLEKHF1Q96S99 279 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms