RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 PAPPA2Q9BXP8 1791 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 FKBP1BP68106 108 aa23.87■■□□□ 1.41
PTCH1-227ENST00000553256 G3BP1Q13283 466 aaKnown RBP eCLIP23.87■■□□□ 1.41
PTCH1-227ENST00000553256 APOBEC3HQ6NTF7 200 aaKnown RBP23.87■■□□□ 1.41
PTCH1-227ENST00000553256 DEFB129Q9H1M3 183 aa23.87■■□□□ 1.41
PTCH1-227ENST00000553256 DDX19BQ9UMR2 479 aa23.87■■□□□ 1.41
PTCH1-227ENST00000553256 CLRN2A0PK11 232 aa23.86■■□□□ 1.41
PTCH1-227ENST00000553256 C2orf69Q8N8R5 385 aa23.86■■□□□ 1.41
PTCH1-227ENST00000553256 ZDHHC15Q96MV8 337 aa23.86■■□□□ 1.41
PTCH1-227ENST00000553256 ZNF70Q9UC06 446 aaPredicted RBP23.86■■□□□ 1.41
PTCH1-227ENST00000553256 FRAT2O75474 233 aaPredicted RBP23.85■■□□□ 1.41
PTCH1-227ENST00000553256 PRDX5P30044 214 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 ECE1P42892 770 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 HHIPL2Q6UWX4 724 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 MOB2Q70IA6 237 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 ZIC5Q96T25 663 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 DENND2AQ9ULE3 1009 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 PPP2R3BQ9Y5P8 575 aa23.85■■□□□ 1.41
PTCH1-227ENST00000553256 AOC2O75106 756 aa23.84■■□□□ 1.41
PTCH1-227ENST00000553256 SURF6O75683 361 aaKnown RBP23.84■■□□□ 1.41
PTCH1-227ENST00000553256 MAP2K2P36507 400 aa23.84■■□□□ 1.41
PTCH1-227ENST00000553256 RGMBQ6NW40 437 aa23.84■■□□□ 1.41
PTCH1-227ENST00000553256 TEPSINQ96N21 525 aa23.84■■□□□ 1.41
PTCH1-227ENST00000553256 TDRD3Q9H7E2 651 aaKnown RBP23.84■■□□□ 1.41
PTCH1-227ENST00000553256 GNL3LQ9NVN8 582 aaKnown RBP23.84■■□□□ 1.41
PTCH1-227ENST00000553256 MYH13Q9UKX3 1938 aa23.84■■□□□ 1.41
PTCH1-227ENST00000553256 ARID4AP29374 1257 aaPredicted RBP23.83■■□□□ 1.41
PTCH1-227ENST00000553256 TNNI3KQ59H18 835 aa23.83■■□□□ 1.41
PTCH1-227ENST00000553256 FPGT-TNNI3KV9GXZ4 949 aa23.83■■□□□ 1.41
PTCH1-227ENST00000553256 MAP3K11Q16584 847 aa23.82■■□□□ 1.4
PTCH1-227ENST00000553256 ZNF384Q8TF68 577 aa23.82■■□□□ 1.4
PTCH1-227ENST00000553256 TEKT1Q969V4 418 aa23.82■■□□□ 1.4
PTCH1-227ENST00000553256 HMG20BQ9P0W2 317 aa23.82■■□□□ 1.4
PTCH1-227ENST00000553256 MYO1BO43795 1136 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 SLC10A3P09131 477 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 RBM5P52756 815 aaKnown RBP eCLIP23.81■■□□□ 1.4
PTCH1-227ENST00000553256 RASA3Q14644 834 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 LDLRAD1Q5T700 205 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 CDAN1Q8IWY9 1227 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 RPAP2Q8IXW5 612 aaPredicted RBP23.81■■□□□ 1.4
PTCH1-227ENST00000553256 MAST3O60307 1309 aa23.81■■□□□ 1.4
PTCH1-227ENST00000553256 FOXN1O15353 648 aa23.8■■□□□ 1.4
PTCH1-227ENST00000553256 DIXDC1Q155Q3 683 aa23.8■■□□□ 1.4
PTCH1-227ENST00000553256 EAF2Q96CJ1 260 aaPredicted RBP23.8■■□□□ 1.4
PTCH1-227ENST00000553256 NEUROD6Q96NK8 337 aa23.8■■□□□ 1.4
PTCH1-227ENST00000553256 DBNDD2Q9BQY9 259 aa23.8■■□□□ 1.4
PTCH1-227ENST00000553256 DAGLAQ9Y4D2 1042 aa23.8■■□□□ 1.4
PTCH1-227ENST00000553256 UBE2Q2LH0YL09 131 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 MCAMP43121 646 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 NBPF12Q5TAG4 269 aaPredicted RBP23.79■■□□□ 1.4
PTCH1-227ENST00000553256 PI16Q6UXB8 463 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 RASAL3Q86YV0 1011 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 VEZTQ9HBM0 779 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 DBNLQ9UJU6 430 aaKnown RBP23.79■■□□□ 1.4
PTCH1-227ENST00000553256 GAKO14976 1311 aa23.79■■□□□ 1.4
PTCH1-227ENST00000553256 MAP2K1Q02750 393 aaPredicted RBP23.78■■□□□ 1.4
PTCH1-227ENST00000553256 NOGQ13253 232 aa23.78■■□□□ 1.4
PTCH1-227ENST00000553256 FKBP1CQ5VVH2 108 aa23.78■■□□□ 1.4
PTCH1-227ENST00000553256 ZNF512BQ96KM6 892 aaPredicted RBP23.78■■□□□ 1.4
PTCH1-227ENST00000553256 FZD1Q9UP38 647 aa23.78■■□□□ 1.4
PTCH1-227ENST00000553256 PAXIP1Q6ZW49 1069 aaPredicted RBP23.77■■□□□ 1.4
PTCH1-227ENST00000553256 CCDC102AQ96A19 550 aa23.77■■□□□ 1.4
PTCH1-227ENST00000553256 FAM163AQ96GL9 167 aaPredicted RBP23.77■■□□□ 1.4
PTCH1-227ENST00000553256 TLR7Q9NYK1 1049 aaKnown RBP23.77■■□□□ 1.4
PTCH1-227ENST00000553256 EXOC6BQ9Y2D4 811 aa23.77■■□□□ 1.4
PTCH1-227ENST00000553256 AKAP11Q9UKA4 1901 aa23.76■■□□□ 1.39
PTCH1-227ENST00000553256 LDHBP07195 334 aaKnown RBP23.76■■□□□ 1.39
PTCH1-227ENST00000553256 ZNF157P51786 506 aaPredicted RBP23.76■■□□□ 1.39
PTCH1-227ENST00000553256 CACNB3P54284 484 aa23.76■■□□□ 1.39
PTCH1-227ENST00000553256 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.76■■□□□ 1.39
PTCH1-227ENST00000553256 SPATA5Q8NB90 893 aa23.76■■□□□ 1.39
PTCH1-227ENST00000553256 RFX7Q2KHR2 1363 aa23.76■■□□□ 1.39
PTCH1-227ENST00000553256 GRM1Q13255 1194 aa23.75■■□□□ 1.39
PTCH1-227ENST00000553256 TNFAIP1Q13829 316 aa23.75■■□□□ 1.39
PTCH1-227ENST00000553256 FAM83AQ86UY5 434 aa23.75■■□□□ 1.39
PTCH1-227ENST00000553256 TMEM39BQ9GZU3 492 aa23.75■■□□□ 1.39
PTCH1-227ENST00000553256 TCP10L2B9ZVM9 353 aa23.74■■□□□ 1.39
PTCH1-227ENST00000553256 USP2O75604 605 aaPredicted RBP23.74■■□□□ 1.39
PTCH1-227ENST00000553256 COL13A1Q5TAT6 717 aaPredicted RBP23.74■■□□□ 1.39
PTCH1-227ENST00000553256 CDC42EP5Q6NZY7 148 aa23.74■■□□□ 1.39
PTCH1-227ENST00000553256 ZGPATQ8N5A5 531 aaKnown RBP23.74■■□□□ 1.39
PTCH1-227ENST00000553256 UQCRFS1P1P0C7P4 283 aa23.73■■□□□ 1.39
PTCH1-227ENST00000553256 HSPA8P11142 646 aaKnown RBP23.73■■□□□ 1.39
PTCH1-227ENST00000553256 NF2P35240 595 aa23.73■■□□□ 1.39
PTCH1-227ENST00000553256 OS9Q13438 667 aaPredicted RBP23.73■■□□□ 1.39
PTCH1-227ENST00000553256 RHPN1Q8TCX5 695 aa23.73■■□□□ 1.39
PTCH1-227ENST00000553256 CHMP4BQ9H444 224 aaKnown RBP23.73■■□□□ 1.39
PTCH1-227ENST00000553256 RRP1P56182 461 aaKnown RBP23.72■■□□□ 1.39
PTCH1-227ENST00000553256 KIF23Q02241 960 aaPredicted RBP23.72■■□□□ 1.39
PTCH1-227ENST00000553256 SUPT20HL1Q3ZLR7 823 aa23.72■■□□□ 1.39
PTCH1-227ENST00000553256 TBC1D9Q6ZT07 1266 aa23.72■■□□□ 1.39
PTCH1-227ENST00000553256 NSUN4Q96CB9 384 aaKnown RBP23.72■■□□□ 1.39
PTCH1-227ENST00000553256 CCDC8Q9H0W5 538 aaPredicted RBP23.72■■□□□ 1.39
PTCH1-227ENST00000553256 RPAP1Q9BWH6 1393 aaPredicted RBP23.72■■□□□ 1.39
PTCH1-227ENST00000553256 UNCXA6NJT0 531 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 MECOMQ03112 1051 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 NFIAQ12857 509 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 PRKG1Q13976 671 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 ARMC9Q7Z3E5 817 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms