RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
DDX23-217ENST00000553065 CACNB3P54284 484 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
DDX23-217ENST00000553065 CAP1Q01518 475 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
DDX23-217ENST00000553065 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.22□□□□□ -0.29
DDX23-217ENST00000553065 LPIN2Q92539 896 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 PTPN18Q99952 460 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 API5Q9BZZ5 524 aaKnown RBP13.22□□□□□ -0.29
DDX23-217ENST00000553065 SIL1Q9H173 461 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
DDX23-217ENST00000553065 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDX23-217ENST00000553065 CIAO1O76071 339 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 TRIM27P14373 513 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 ADORA1P30542 326 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 NF2P35240 595 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 TIMM10P62072 90 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
DDX23-217ENST00000553065 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 WNK4Q96J92 1243 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
DDX23-217ENST00000553065 GPR25O00155 361 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
DDX23-217ENST00000553065 PHKA1P46020 1223 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 ZDHHC15Q96MV8 337 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
DDX23-217ENST00000553065 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
DDX23-217ENST00000553065 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
DDX23-217ENST00000553065 MYO1BO43795 1136 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
DDX23-217ENST00000553065 MTX1Q13505 466 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 TBC1D22AQ8WUA7 517 aa13.19□□□□□ -0.3
DDX23-217ENST00000553065 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 UNCXA6NJT0 531 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 ZBTB22O15209 634 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 SLC5A1P13866 664 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 PRDX5P30044 214 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 IL15P40933 162 aaPredicted RBP13.18□□□□□ -0.3
DDX23-217ENST00000553065 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
DDX23-217ENST00000553065 ZFPM1Q8IX07 1006 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX23-217ENST00000553065 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
DDX23-217ENST00000553065 HTTP42858 3142 aa13.18□□□□□ -0.3
DDX23-217ENST00000553065 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
DDX23-217ENST00000553065 ZBTB48P10074 688 aaPredicted RBP13.17□□□□□ -0.3
DDX23-217ENST00000553065 TFCP2Q12800 502 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 NFIAQ12857 509 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 CTU1Q7Z7A3 348 aaKnown RBP13.17□□□□□ -0.3
DDX23-217ENST00000553065 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
DDX23-217ENST00000553065 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
DDX23-217ENST00000553065 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 INHBEP58166 350 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 FAM198AQ9UFP1 575 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 CENPFP49454 3210 aa13.16□□□□□ -0.3
DDX23-217ENST00000553065 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 RLBP1P12271 317 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
DDX23-217ENST00000553065 SREBF2Q12772 1141 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 VGLL4Q14135 290 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 FAM83AQ86UY5 434 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.3
DDX23-217ENST00000553065 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 GNAI3P08754 354 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
DDX23-217ENST00000553065 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms