RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.84□□□□□ -0.67
PPFIA2-228ENST00000553058 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
PPFIA2-228ENST00000553058 RAB3GAP2Q9H2M9 1393 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 POTEB2H3BUK9 544 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 PDGFRBP09619 1106 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 ZDHHC1Q8WTX9 485 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 XAGE2Q96GT9 111 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 NOC4LQ9BVI4 516 aaKnown RBP10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 FOXD3Q9UJU5 478 aaPredicted RBP10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 USP21Q9UK80 565 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
PPFIA2-228ENST00000553058 CCDC85CA6NKD9 419 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 TNFRSF21O75509 655 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 SOX9P48436 509 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 TLR1Q15399 786 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 ARSHQ5FYA8 562 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 APPBP2Q92624 585 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 FAM13BQ9NYF5 915 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
PPFIA2-228ENST00000553058 LILRA1O75019 489 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 IL2RAP01589 272 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 GYS2P54840 703 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 DHX9Q08211 1270 aaKnown RBP10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 LILRB2Q8N423 598 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 NBPF15Q8N660 670 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 EAF1Q96JC9 268 aaPredicted RBP10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 PHACTR1Q9C0D0 580 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 ARHGEF10LQ9HCE6 1279 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 TYW1Q9NV66 732 aaKnown RBP10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 TRPC5Q9UL62 973 aaPredicted RBP10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 FCF1Q9Y324 198 aaKnown RBP10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
PPFIA2-228ENST00000553058 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 CBLBQ13191 982 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 KIAA0907Q7Z7F0 614 aaPredicted RBP10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 JDP2Q8WYK2 163 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 BCO2Q9BYV7 579 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
PPFIA2-228ENST00000553058 SLIT2O94813 1529 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 ESYT3A0FGR9 886 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 POTECB2RU33 542 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 HRO43593 1189 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 PWP1Q13610 501 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 TICAM2Q86XR7 235 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 HOMER1Q86YM7 354 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 RELL1Q8IUW5 271 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 PRAM1Q96QH2 718 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 ZFYVE28Q9HCC9 887 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 DLC1Q96QB1 1528 aa10.79□□□□□ -0.68
PPFIA2-228ENST00000553058 DHX57Q6P158 1386 aaKnown RBP10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 MINDY4BA8MYZ0 360 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 EIF4A3P38919 411 aaKnown RBP10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 TRPM4Q8TD43 1214 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 SNX29Q8TEQ0 813 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 CPLX3Q8WVH0 158 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 PMM1Q92871 262 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 DNAJC7Q99615 494 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 PARP3Q9Y6F1 533 aa10.78□□□□□ -0.68
PPFIA2-228ENST00000553058 F6X3S4 739 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 FSHRP23945 695 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 COL9A2Q14055 689 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 CCAR1Q8IX12 1150 aaKnown RBP10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 SMC5Q8IY18 1101 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 ZNF296Q8WUU4 475 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 WNT2BQ93097 391 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 CCDC113Q9H0I3 377 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 NPHS2Q9NP85 383 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 TTF2Q9UNY4 1162 aaKnown RBP10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 PRR36Q9H6K5 1346 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
PPFIA2-228ENST00000553058 USP32Q8NFA0 1604 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 TNS3Q68CZ2 1445 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 UNC5CLQ8IV45 518 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 CNKSR1Q969H4 720 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 TMEM74Q96NL1 305 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 MSRB2Q9Y3D2 182 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 HRH3Q9Y5N1 445 aa10.76□□□□□ -0.69
PPFIA2-228ENST00000553058 GLI3P10071 1580 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms