RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 CRBNQ96SW2 442 aa17.3■□□□□ 0.36
SMARCC2-212ENST00000552566 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
SMARCC2-212ENST00000552566 TM4SF4P48230 202 aa17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 AAMPQ13685 434 aa17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 RASA3Q14644 834 aa17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 CAVIN4Q5BKX8 364 aa17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 NBPF12Q5TAG4 269 aaPredicted RBP17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
SMARCC2-212ENST00000552566 ERICH6BQ5W0A0 696 aa17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 SERPINA10Q9UK55 444 aa17.28■□□□□ 0.36
SMARCC2-212ENST00000552566 MYH3P11055 1940 aa17.27■□□□□ 0.36
SMARCC2-212ENST00000552566 GNAI3P08754 354 aa17.27■□□□□ 0.36
SMARCC2-212ENST00000552566 FBXO33Q7Z6M2 555 aa17.27■□□□□ 0.36
SMARCC2-212ENST00000552566 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 TCP10L2B9ZVM9 353 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 PDE8BO95263 885 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 CRKP46108 304 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 RGS19P49795 217 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 BCAMP50895 628 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 TNFAIP1Q13829 316 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 GRIK5Q16478 980 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SMARCC2-212ENST00000552566 GPR25O00155 361 aa17.25■□□□□ 0.35
SMARCC2-212ENST00000552566 SOX10P56693 466 aa17.25■□□□□ 0.35
SMARCC2-212ENST00000552566 MAP3K11Q16584 847 aa17.25■□□□□ 0.35
SMARCC2-212ENST00000552566 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
SMARCC2-212ENST00000552566 MANSC4A6NHS7 340 aaPredicted RBP17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 USP2O75604 605 aaPredicted RBP17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 WNK4Q96J92 1243 aa17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 R3HDMLQ9H3Y0 253 aa17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 POLR2AP24928 1970 aaKnown RBP17.24■□□□□ 0.35
SMARCC2-212ENST00000552566 SSC5DA1L4H1 1573 aa17.23■□□□□ 0.35
SMARCC2-212ENST00000552566 ZBTB7BO15156 539 aaPredicted RBP17.23■□□□□ 0.35
SMARCC2-212ENST00000552566 PUM3Q15397 648 aaKnown RBP17.23■□□□□ 0.35
SMARCC2-212ENST00000552566 TBC1D22AQ8WUA7 517 aa17.23■□□□□ 0.35
SMARCC2-212ENST00000552566 EYA2O00167 538 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 FKTNO75072 461 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 ALDH1A1P00352 501 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 ZBTB48P10074 688 aaPredicted RBP17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 TNNI2P48788 182 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 INHBEP58166 350 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 IFNL1Q8IU54 200 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 TEKT1Q969V4 418 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 SIL1Q9H173 461 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 HPS5Q9UPZ3 1129 aa17.22■□□□□ 0.35
SMARCC2-212ENST00000552566 GNAI2P04899 355 aa17.21■□□□□ 0.35
SMARCC2-212ENST00000552566 SLC5A1P13866 664 aa17.21■□□□□ 0.35
SMARCC2-212ENST00000552566 CACNB3P54284 484 aa17.21■□□□□ 0.35
SMARCC2-212ENST00000552566 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
SMARCC2-212ENST00000552566 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
SMARCC2-212ENST00000552566 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 FGFR2P21802 821 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 LPIN2Q92539 896 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 MEIS3Q99687 375 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
SMARCC2-212ENST00000552566 IGF2BP3O00425 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 GJA5P36382 358 aa17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
SMARCC2-212ENST00000552566 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
SMARCC2-212ENST00000552566 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
SMARCC2-212ENST00000552566 CFHR5Q9BXR6 569 aa17.18■□□□□ 0.34
SMARCC2-212ENST00000552566 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 CSADQ9Y600 493 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 MAST3O60307 1309 aa17.17■□□□□ 0.34
SMARCC2-212ENST00000552566 VGLL4Q14135 290 aa17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 FBXO46Q6PJ61 603 aaPredicted RBP17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
SMARCC2-212ENST00000552566 HMMRO75330 724 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms