RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 CARMIL3Q8ND23 1372 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 EPB41L2O43491 1005 aaKnown RBP14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 COBLO75128 1261 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 NCOA7Q8NI08 942 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 NAPBQ9H115 298 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 CRKLP46109 303 aaKnown RBP14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 RAI14Q9P0K7 980 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 HPS5Q9UPZ3 1129 aa14.28□□□□□ -0.12
PRICKLE1-209ENST00000552240 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 ITPK1Q13572 414 aa14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 CLSTN2Q9H4D0 955 aa14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 CFAP45Q9UL16 551 aa14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.12
PRICKLE1-209ENST00000552240 TPM2P07951 284 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 KLRK1P26718 216 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 METAP2P50579 478 aaKnown RBP eCLIP14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 DDB1Q16531 1140 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 TMEM67Q5HYA8 995 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 LCORLQ8N3X6 602 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 ALG1Q9BT22 464 aa14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZNF500O60304 480 aaPredicted RBP14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 DPCR1Q3MIW9 517 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 LMOD1P29536 600 aaPredicted RBP14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 IGSF3O75054 1194 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 TSGA10IPQ3SY00 556 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 VPS37DQ86XT2 251 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
PRICKLE1-209ENST00000552240 FOXN1O15353 648 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 SMC2O95347 1197 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 DYNLL1P63167 89 aaKnown RBP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 SRP68Q9UHB9 627 aaKnown RBP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 USP27XA6NNY8 438 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 LETM1O95202 739 aaPredicted RBP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 ADD2P35612 726 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 SPATA5Q8NB90 893 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 EPB41L4AQ9HCS5 686 aaPredicted RBP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 GRIN1Q05586 938 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 STAMQ92783 540 aa14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRICKLE1-209ENST00000552240 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 CASP1P29466 404 aa14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 NR5A1Q13285 461 aa14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 MB21D2Q8IYB1 491 aaPredicted RBP14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 FAM205CA6NFA0 338 aa14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 GOLGA8AA7E2F4 631 aa14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 WDHD1O75717 1129 aaPredicted RBP14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 SNW1Q13573 536 aaKnown RBP14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
PRICKLE1-209ENST00000552240 SCN11AQ9UI33 1791 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 PDE8AO60658 829 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 CSF1RP07333 972 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 SIK1P57059 783 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 RANBP6O60518 1105 aaKnown RBP14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 NMT2O60551 498 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 CYP7A1P22680 504 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 CPDO75976 1380 aa14.23□□□□□ -0.13
PRICKLE1-209ENST00000552240 SPTLC2O15270 562 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 CIAO1O76071 339 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 ATP1A3P13637 1013 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 HMGN5P82970 282 aaKnown RBP14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 PNOCQ13519 176 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 KRT40Q6A162 431 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZNF75DP51815 510 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 ERFEQ4G0M1 354 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
PRICKLE1-209ENST00000552240 ZBTB43O43298 467 aa14.21□□□□□ -0.13
PRICKLE1-209ENST00000552240 CHRNDQ07001 517 aa14.21□□□□□ -0.13
PRICKLE1-209ENST00000552240 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.13
PRICKLE1-209ENST00000552240 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms