RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 NCOR1O75376 2440 aa13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 F8W031 263 aaPredicted RBP13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 TFRCP02786 760 aaKnown RBP13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
SLC48A1-209ENST00000552003 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 SNAP23O00161 211 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 IRF6O14896 467 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 PDE8AO60658 829 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 ELNP15502 786 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 PLA2G5P39877 138 aa13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 ZCCHC17Q9NP64 241 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-209ENST00000552003 CETPP11597 493 aa13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 UBXN2AP68543 259 aa13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
SLC48A1-209ENST00000552003 INHAP05111 366 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 MOGSQ13724 837 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 UBE2OQ9C0C9 1292 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 GREM2Q9H772 168 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 JAG2Q9Y219 1238 aa13.35□□□□□ -0.27
SLC48A1-209ENST00000552003 HOXD10P28358 340 aa13.34□□□□□ -0.27
SLC48A1-209ENST00000552003 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
SLC48A1-209ENST00000552003 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
SLC48A1-209ENST00000552003 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
SLC48A1-209ENST00000552003 CDX2Q99626 313 aaPredicted RBP13.34□□□□□ -0.27
SLC48A1-209ENST00000552003 ADCY3O60266 1144 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 BCRP11274 1271 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 NECAB2Q7Z6G3 386 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 MYD88Q99836 296 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 TDRD3Q9H7E2 651 aaKnown RBP13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 LEMD3Q9Y2U8 911 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 BDP1A6H8Y1 2624 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 DDX60LQ5H9U9 1706 aaKnown RBP13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.28
SLC48A1-209ENST00000552003 PDHXO00330 501 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 MYO1BO43795 1136 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 FLT3LGP49771 235 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 CTSWP56202 376 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 ERO1BQ86YB8 467 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 PHAXQ9H814 394 aaKnown RBP13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 CSADQ9Y600 493 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 MYH3P11055 1940 aa13.32□□□□□ -0.28
SLC48A1-209ENST00000552003 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 PPIL2Q13356 520 aa13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 ANKRD23Q86SG2 305 aa13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
SLC48A1-209ENST00000552003 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
SLC48A1-209ENST00000552003 CYP2C8P10632 490 aa13.3□□□□□ -0.28
SLC48A1-209ENST00000552003 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
SLC48A1-209ENST00000552003 FAM122AQ96E09 287 aa13.3□□□□□ -0.28
SLC48A1-209ENST00000552003 CHL1O00533 1208 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 FCGRTP55899 365 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 MDM2Q00987 491 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 GPAT2Q6NUI2 795 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 PFASO15067 1338 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 PIEZO1Q92508 2521 aa13.29□□□□□ -0.28
SLC48A1-209ENST00000552003 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 IL1R1P14778 569 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 CACNB3P54284 484 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 RIPK4P57078 832 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 FKBP1AP62942 108 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 MYLIPQ8WY64 445 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 WRNIP1Q96S55 665 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 SEMA6BQ9H3T3 888 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 HYPKQ9NX55 129 aa13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 CWC25Q9NXE8 425 aaPredicted RBP13.28□□□□□ -0.28
SLC48A1-209ENST00000552003 TAF5LO75529 589 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 INPP5BP32019 993 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 TRIM32Q13049 653 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 IRF5Q13568 498 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 TNFAIP1Q13829 316 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 GRIK5Q16478 980 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms