RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CHRNDQ07001 517 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 SPDYE2Q495Y8 402 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 HELBQ8NG08 1087 aaPredicted RBP18.64■□□□□ 0.57
VPS29-209ENST00000551655 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
VPS29-209ENST00000551655 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 UNC93B1Q9H1C4 597 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 MBIPQ9NS73 344 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
VPS29-209ENST00000551655 CSADQ9Y600 493 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 SNCAIPQ9Y6H5 919 aa18.64■□□□□ 0.57
VPS29-209ENST00000551655 SPDYE5A6NIY4 337 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 GNRH1P01148 92 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 ITGA6P23229 1130 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
VPS29-209ENST00000551655 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 MYPNQ86TC9 1320 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 VCANP13611 3396 aa18.63■□□□□ 0.57
VPS29-209ENST00000551655 FMNL1O95466 1100 aaPredicted RBP18.62■□□□□ 0.57
VPS29-209ENST00000551655 CETPP11597 493 aa18.62■□□□□ 0.57
VPS29-209ENST00000551655 IRF6O14896 467 aa18.61■□□□□ 0.57
VPS29-209ENST00000551655 WDHD1O75717 1129 aaPredicted RBP18.61■□□□□ 0.57
VPS29-209ENST00000551655 PRKCZQ05513 592 aa18.61■□□□□ 0.57
VPS29-209ENST00000551655 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
VPS29-209ENST00000551655 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
VPS29-209ENST00000551655 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
VPS29-209ENST00000551655 STXBP5LQ9Y2K9 1186 aa18.61■□□□□ 0.57
VPS29-209ENST00000551655 IL1R1P14778 569 aa18.6■□□□□ 0.57
VPS29-209ENST00000551655 TNFAIP1Q13829 316 aa18.6■□□□□ 0.57
VPS29-209ENST00000551655 MGAMO43451 1857 aa18.59■□□□□ 0.57
VPS29-209ENST00000551655 MTMR10Q9NXD2 777 aa18.59■□□□□ 0.57
VPS29-209ENST00000551655 GABRQQ9UN88 632 aa18.59■□□□□ 0.57
VPS29-209ENST00000551655 ADGRA2Q96PE1 1338 aa18.58■□□□□ 0.57
VPS29-209ENST00000551655 EYSQ5T1H1 3165 aa18.58■□□□□ 0.57
VPS29-209ENST00000551655 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 SGPL1O95470 568 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 CACNB3P54284 484 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 FKBP1AP62942 108 aaKnown RBP18.58■□□□□ 0.56
VPS29-209ENST00000551655 UBXN2AP68543 259 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 SNAPC2Q13487 334 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 GDF15Q99988 308 aa18.58■□□□□ 0.56
VPS29-209ENST00000551655 ZCCHC17Q9NP64 241 aaKnown RBP18.58■□□□□ 0.56
VPS29-209ENST00000551655 ZMYND8Q9ULU4 1186 aaPredicted RBP18.58■□□□□ 0.56
VPS29-209ENST00000551655 TTF2Q9UNY4 1162 aaKnown RBP18.58■□□□□ 0.56
VPS29-209ENST00000551655 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
VPS29-209ENST00000551655 HOXD10P28358 340 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 BCAMP50895 628 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 ZNF804AQ7Z570 1209 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
VPS29-209ENST00000551655 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.57■□□□□ 0.56
VPS29-209ENST00000551655 DIS3LQ8TF46 1054 aaKnown RBP18.57■□□□□ 0.56
VPS29-209ENST00000551655 WRNIP1Q96S55 665 aa18.57■□□□□ 0.56
VPS29-209ENST00000551655 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
VPS29-209ENST00000551655 H7C1W4 665 aa18.56■□□□□ 0.56
VPS29-209ENST00000551655 PDHXO00330 501 aa18.56■□□□□ 0.56
VPS29-209ENST00000551655 ELNP15502 786 aa18.56■□□□□ 0.56
VPS29-209ENST00000551655 C15orf52Q6ZUT6 534 aaKnown RBP18.56■□□□□ 0.56
VPS29-209ENST00000551655 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.56■□□□□ 0.56
VPS29-209ENST00000551655 C7orf61Q8IZ16 206 aa18.56■□□□□ 0.56
VPS29-209ENST00000551655 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
VPS29-209ENST00000551655 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
VPS29-209ENST00000551655 PPIL2Q13356 520 aa18.55■□□□□ 0.56
VPS29-209ENST00000551655 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
VPS29-209ENST00000551655 GRIK5Q16478 980 aa18.55■□□□□ 0.56
VPS29-209ENST00000551655 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
VPS29-209ENST00000551655 PAWRQ96IZ0 340 aaKnown RBP18.55■□□□□ 0.56
VPS29-209ENST00000551655 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
VPS29-209ENST00000551655 ZNF853P0CG23 659 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 SYN1P17600 705 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 CRKP46108 304 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 GPR153Q6NV75 609 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 SERPINA10Q9UK55 444 aa18.54■□□□□ 0.56
VPS29-209ENST00000551655 INHAP05111 366 aa18.53■□□□□ 0.56
VPS29-209ENST00000551655 CSF1RP07333 972 aa18.53■□□□□ 0.56
VPS29-209ENST00000551655 TNNI2P48788 182 aa18.53■□□□□ 0.56
VPS29-209ENST00000551655 CASP7P55210 303 aa18.53■□□□□ 0.56
VPS29-209ENST00000551655 SLAIN1Q8ND83 568 aa18.53■□□□□ 0.56
VPS29-209ENST00000551655 LAMA2P24043 3122 aaKnown RBP18.53■□□□□ 0.56
VPS29-209ENST00000551655 FAM205AQ6ZU69 1335 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 PLIN1O60240 522 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 INPP5BP32019 993 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 BMP8BP34820 402 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 NEXNQ0ZGT2 675 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 MOGSQ13724 837 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 ANKRD23Q86SG2 305 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 RUNDC1Q96C34 613 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 PLA2G12BQ9BX93 195 aa18.52■□□□□ 0.56
VPS29-209ENST00000551655 ADCY3O60266 1144 aa18.51■□□□□ 0.55
VPS29-209ENST00000551655 CYP2C8P10632 490 aa18.51■□□□□ 0.55
VPS29-209ENST00000551655 FCGRTP55899 365 aa18.51■□□□□ 0.55
VPS29-209ENST00000551655 ANKRD18BA2A2Z9 1011 aa18.5■□□□□ 0.55
VPS29-209ENST00000551655 BCRP11274 1271 aa18.5■□□□□ 0.55
VPS29-209ENST00000551655 MAGEA10P43363 369 aaPredicted RBP18.5■□□□□ 0.55
VPS29-209ENST00000551655 GYG1P46976 350 aa18.5■□□□□ 0.55
VPS29-209ENST00000551655 LRIT3Q3SXY7 679 aa18.5■□□□□ 0.55
VPS29-209ENST00000551655 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
VPS29-209ENST00000551655 G2E3Q7L622 706 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms