RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 GRIN3AQ8TCU5 1115 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
HCFC2-204ENST00000550335 TRIM33Q9UPN9 1127 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 C2CD2LO14523 706 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 BPNT1O95861 308 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 NME2P22392 152 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 GK5Q6ZS86 529 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
HCFC2-204ENST00000550335 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
HCFC2-204ENST00000550335 SMAD7O15105 426 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 BMP6P22004 513 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 EIF6P56537 245 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 LRRC14Q15048 493 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 CWF19L2Q2TBE0 894 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 ZNF746Q6NUN9 644 aaPredicted RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 LLGL2Q6P1M3 1020 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 SLITRK4Q8IW52 837 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 STK35Q8TDR2 534 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 GATAD2BQ8WXI9 593 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 ZC3H12CQ9C0D7 883 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 ST7Q9NRC1 585 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 SIRPGQ9P1W8 387 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 CYP8B1Q9UNU6 501 aa8.38□□□□□ -1.07
HCFC2-204ENST00000550335 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
HCFC2-204ENST00000550335 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 MX2P20592 715 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 ARNTP27540 789 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 ZNF165P49910 485 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 CABP4P57796 275 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 IKBKEQ14164 716 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 NBPF6Q5VWK0 638 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 JAZF1Q86VZ6 243 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 NBPF4Q96M43 638 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 PRKAG3Q9UGI9 489 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 TBX22Q9Y458 520 aa8.37□□□□□ -1.07
HCFC2-204ENST00000550335 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 SIN3BO75182 1162 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 CLSTN1O94985 981 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 ADH7P40394 386 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 RAB33AQ14088 237 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 DDX54Q8TDD1 881 aaKnown RBP8.36□□□□□ -1.07
HCFC2-204ENST00000550335 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 KCNB2Q92953 911 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 EMILIN2Q9BXX0 1053 aa8.36□□□□□ -1.07
HCFC2-204ENST00000550335 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
HCFC2-204ENST00000550335 KLF4O43474 513 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 B3GALT4O96024 378 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
HCFC2-204ENST00000550335 CDC27P30260 824 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 GSTM4Q03013 218 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 MPP2Q14168 576 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 PPP2R5EQ16537 467 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
HCFC2-204ENST00000550335 MPRIPQ6WCQ1 1025 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 SHDQ96IW2 340 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
HCFC2-204ENST00000550335 NEURL1BA8MQ27 555 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 CLCQ05315 142 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 SERINC3Q13530 473 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 PSAPL1Q6NUJ1 521 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
HCFC2-204ENST00000550335 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
HCFC2-204ENST00000550335 FAM221AA4D161 298 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
HCFC2-204ENST00000550335 RGS9O75916 674 aaPredicted RBP8.33□□□□□ -1.08
HCFC2-204ENST00000550335 TRIM37O94972 964 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
HCFC2-204ENST00000550335 TCEAL1Q15170 157 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
HCFC2-204ENST00000550335 TXNDC11Q6PKC3 985 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 FAM169BQ8N8A8 192 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 MKL1Q969V6 931 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 DEPDC7Q96QD5 511 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 LPIN3Q9BQK8 851 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 PCDHB14Q9Y5E9 798 aa8.33□□□□□ -1.08
HCFC2-204ENST00000550335 FAM221BA6H8Z2 402 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 CILPO75339 1184 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 EPHA1P21709 976 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 ADH6P28332 368 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 REC114Q7Z4M0 266 aa8.32□□□□□ -1.08
HCFC2-204ENST00000550335 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms