RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 MFSD14BQ5SR56 506 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 CD99L2Q8TCZ2 262 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
TRAFD1-207ENST00000550051 ALDH1L1O75891 902 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 MAP3K9P80192 1104 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 HDLBPQ00341 1268 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 ARHGEF6Q15052 776 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 MRIQ9BWK5 157 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 C9orf78Q9NZ63 289 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 JAG2Q9Y219 1238 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
TRAFD1-207ENST00000550051 GYG1P46976 350 aa12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 CAP1Q01518 475 aa12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-207ENST00000550051 HTTP42858 3142 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 EN2P19622 333 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 CRKP46108 304 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 TNNI2P48788 182 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 GTF2A2P52657 109 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 ZFYVE28Q9HCC9 887 aa12.46□□□□□ -0.41
TRAFD1-207ENST00000550051 CENPFP49454 3210 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 UTYO14607 1347 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 MROH5Q6ZUA9 1318 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 VGLL4Q14135 290 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 NBPF11Q86T75 865 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 SRCIN1Q9C0H9 1055 aa12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 ZCCHC17Q9NP64 241 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-207ENST00000550051 CCL15-CCL14A0A0B4J2E2 113 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 CCL15Q16663 113 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 FKBP1CQ5VVH2 108 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 ZNF333Q96JL9 665 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 TMEM39BQ9GZU3 492 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 CSADQ9Y600 493 aa12.44□□□□□ -0.42
TRAFD1-207ENST00000550051 ARAP2Q8WZ64 1704 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 GRIK5Q16478 980 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 FAM83AQ86UY5 434 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 ERO1BQ86YB8 467 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 FAM43AQ8N2R8 423 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 HOOK2Q96ED9 719 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 ZDHHC15Q96MV8 337 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-207ENST00000550051 TLR2O60603 784 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 PDE8BO95263 885 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 GNRH1P01148 92 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 CETPP11597 493 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
TRAFD1-207ENST00000550051 PRMT2P55345 433 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 VGLL2Q8N8G2 317 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 PTCH2Q9Y6C5 1203 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 SNCAIPQ9Y6H5 919 aa12.41□□□□□ -0.42
TRAFD1-207ENST00000550051 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 BRCA2P51587 3418 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 SNAPC2Q13487 334 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 METTL24Q5JXM2 366 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 HHIPL2Q6UWX4 724 aa12.4□□□□□ -0.42
TRAFD1-207ENST00000550051 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms