RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-229ENST00000549883 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
HDAC7-229ENST00000549883 PRDX5P30044 214 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 ECE1P42892 770 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 MMP14P50281 582 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 G3BP1Q13283 466 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC7-229ENST00000549883 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
HDAC7-229ENST00000549883 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 SERPINA10Q9UK55 444 aa12.12□□□□□ -0.47
HDAC7-229ENST00000549883 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 SURF6O75683 361 aaKnown RBP12.11□□□□□ -0.47
HDAC7-229ENST00000549883 RASA3Q14644 834 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
HDAC7-229ENST00000549883 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
HDAC7-229ENST00000549883 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
HDAC7-229ENST00000549883 SIRT2Q8IXJ6 389 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 TBC1D22AQ8WUA7 517 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
HDAC7-229ENST00000549883 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 ZNF157P51786 506 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-229ENST00000549883 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-229ENST00000549883 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
HDAC7-229ENST00000549883 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-229ENST00000549883 EXOC6BQ9Y2D4 811 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
HDAC7-229ENST00000549883 MYO1BO43795 1136 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 SLC10A3P09131 477 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 HDLBPQ00341 1268 aaKnown RBP12.09□□□□□ -0.47
HDAC7-229ENST00000549883 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-229ENST00000549883 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-229ENST00000549883 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 RASAL3Q86YV0 1011 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 ZDHHC15Q96MV8 337 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
HDAC7-229ENST00000549883 HMG20BQ9P0W2 317 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 NOP58Q9Y2X3 529 aaKnown RBP12.09□□□□□ -0.47
HDAC7-229ENST00000549883 DAGLAQ9Y4D2 1042 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
HDAC7-229ENST00000549883 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 HSPA8P11142 646 aaKnown RBP12.08□□□□□ -0.48
HDAC7-229ENST00000549883 MAP2K2P36507 400 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 LBX1P52954 281 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
HDAC7-229ENST00000549883 HHIPL2Q6UWX4 724 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 ANGEL1Q9UNK9 670 aaKnown RBP12.08□□□□□ -0.48
HDAC7-229ENST00000549883 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
HDAC7-229ENST00000549883 SEMA3EO15041 775 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 MS4A1P11836 297 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 MCAMP43121 646 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 FKBP1BP68106 108 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 NOGQ13253 232 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 EAF2Q96CJ1 260 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 DBNLQ9UJU6 430 aaKnown RBP12.07□□□□□ -0.48
HDAC7-229ENST00000549883 DDX19BQ9UMR2 479 aa12.07□□□□□ -0.48
HDAC7-229ENST00000549883 APBB1O00213 710 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-229ENST00000549883 NF2P35240 595 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 CTCFP49711 727 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-229ENST00000549883 NFIAQ12857 509 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 GORABQ5T7V8 394 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 ZFPM1Q8IX07 1006 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 MAST3O60307 1309 aa12.06□□□□□ -0.48
HDAC7-229ENST00000549883 ZBTB22O15209 634 aa12.05□□□□□ -0.48
HDAC7-229ENST00000549883 PDE3AQ14432 1141 aa12.05□□□□□ -0.48
HDAC7-229ENST00000549883 ARMC9Q7Z3E5 817 aa12.05□□□□□ -0.48
HDAC7-229ENST00000549883 BCL11AQ9H165 835 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms