RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CDAN1Q8IWY9 1227 aa15.57■□□□□ 0.08
DDX54-206ENST00000549271 WWC1Q8IX03 1113 aa15.57■□□□□ 0.08
DDX54-206ENST00000549271 PI4KAP1Q8N8J0 262 aa15.57■□□□□ 0.08
DDX54-206ENST00000549271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.57■□□□□ 0.085e-9■■■■■ 55.3
DDX54-206ENST00000549271 SRRDQ9UH36 339 aa15.57■□□□□ 0.08
DDX54-206ENST00000549271 ALPK3Q96L96 1907 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 WDHD1O75717 1129 aaPredicted RBP15.56■□□□□ 0.08
DDX54-206ENST00000549271 CCL5P13501 91 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 IL1R1P14778 569 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 TNFAIP1Q13829 316 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 IL16Q14005 1332 aa15.56■□□□□ 0.08
DDX54-206ENST00000549271 SPDYE5A6NIY4 337 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 BTBD19C9JJ37 291 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 CETPP11597 493 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 GRK4P32298 578 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 CHRNDQ07001 517 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 NEXNQ0ZGT2 675 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 GPR153Q6NV75 609 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 C17orf99Q6UX52 265 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 TSR2Q969E8 191 aaKnown RBP15.55■□□□□ 0.08
DDX54-206ENST00000549271 TRIM47Q96LD4 638 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 ZNF70Q9UC06 446 aaPredicted RBP15.55■□□□□ 0.08
DDX54-206ENST00000549271 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 CSADQ9Y600 493 aa15.55■□□□□ 0.08
DDX54-206ENST00000549271 MGAMO43451 1857 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 NEURL1BA8MQ27 555 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 H7C1W4 665 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 SNAP23O00161 211 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 ITGA6P23229 1130 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 PSMC4P43686 418 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 KCNJ4P48050 445 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
DDX54-206ENST00000549271 HELBQ8NG08 1087 aaPredicted RBP15.54■□□□□ 0.08
DDX54-206ENST00000549271 MPHOSPH8Q99549 860 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 RNF208Q9H0X6 261 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
DDX54-206ENST00000549271 FARP2O94887 1054 aaPredicted RBP15.53■□□□□ 0.08
DDX54-206ENST00000549271 OSBPP22059 807 aa15.53■□□□□ 0.08
DDX54-206ENST00000549271 RBM5P52756 815 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX54-206ENST00000549271 U2AF1L4Q8WU68 220 aaKnown RBP15.53■□□□□ 0.08
DDX54-206ENST00000549271 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
DDX54-206ENST00000549271 STAP2Q9UGK3 403 aa15.53■□□□□ 0.08
DDX54-206ENST00000549271 SNCAIPQ9Y6H5 919 aa15.53■□□□□ 0.08
DDX54-206ENST00000549271 IRF6O14896 467 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 EVI5O60447 810 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 HOXD10P28358 340 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.08
DDX54-206ENST00000549271 G2E3Q7L622 706 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 ZNF804AQ7Z570 1209 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 RAET1EQ8TD07 263 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 TMEM39BQ9GZU3 492 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.08
DDX54-206ENST00000549271 STXBP5LQ9Y2K9 1186 aa15.52■□□□□ 0.08
DDX54-206ENST00000549271 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
DDX54-206ENST00000549271 CSF1RP07333 972 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 SNAPC2Q13487 334 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 UBE3BQ7Z3V4 1068 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 COL25A1Q9BXS0 654 aaPredicted RBP15.51■□□□□ 0.07
DDX54-206ENST00000549271 CPA4Q9UI42 421 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 SERPINA10Q9UK55 444 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 JAG2Q9Y219 1238 aa15.51■□□□□ 0.07
DDX54-206ENST00000549271 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
DDX54-206ENST00000549271 FAM205AQ6ZU69 1335 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 MYPNQ86TC9 1320 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 TAF5LO75529 589 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 SGPL1O95470 568 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 BMP8BP34820 402 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 CASP7P55210 303 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 UBXN2AP68543 259 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 FLIIQ13045 1269 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 PPIL2Q13356 520 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 GCKRQ14397 625 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
DDX54-206ENST00000549271 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 GDF15Q99988 308 aa15.5■□□□□ 0.07
DDX54-206ENST00000549271 TCP10L2B9ZVM9 353 aa15.49■□□□□ 0.07
DDX54-206ENST00000549271 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
DDX54-206ENST00000549271 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
DDX54-206ENST00000549271 LINS1Q8NG48 757 aa15.49■□□□□ 0.07
DDX54-206ENST00000549271 UNC93B1Q9H1C4 597 aa15.49■□□□□ 0.07
DDX54-206ENST00000549271 VCANP13611 3396 aa15.49■□□□□ 0.07
DDX54-206ENST00000549271 CAPN2P17655 700 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 TNNI2P48788 182 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 Q7L0L9 218 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 ANKRD23Q86SG2 305 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 SLAIN1Q8ND83 568 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 DNAAF4Q8WXU2 420 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
DDX54-206ENST00000549271 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
DDX54-206ENST00000549271 BIN2Q9UBW5 565 aaPredicted RBP15.48■□□□□ 0.07
DDX54-206ENST00000549271 TTF2Q9UNY4 1162 aaKnown RBP15.48■□□□□ 0.07
DDX54-206ENST00000549271 PRKCZQ05513 592 aa15.47■□□□□ 0.07
DDX54-206ENST00000549271 MFSD14BQ5SR56 506 aa15.47■□□□□ 0.07
DDX54-206ENST00000549271 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms