RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ZAP70P43403 619 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 GYG1P46976 350 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 BCAMP50895 628 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 OLFM4Q6UX06 510 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 SP8Q8IXZ3 490 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 FAM84BQ96KN1 310 aaPredicted RBP9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 GPR101Q96P66 508 aaPredicted RBP9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 ANTXR1Q9H6X2 564 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 PODXL2Q9NZ53 605 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 RFX7Q2KHR2 1363 aa9.83□□□□□ -0.84
DEPDC4-207ENST00000549249 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 H0YIN7 160 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 GOLIM4O00461 696 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 CHGBP05060 677 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 UQCRFS1P1P0C7P4 283 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 KCNA3P22001 575 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 RASGRF1Q13972 1273 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 ESYT1Q9BSJ8 1104 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 PAG1Q9NWQ8 432 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 HMG20BQ9P0W2 317 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 LEMD3Q9Y2U8 911 aa9.82□□□□□ -0.84
DEPDC4-207ENST00000549249 MAST2Q6P0Q8 1798 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 UFL1O94874 794 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 DPEP1P16444 411 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 ATP2B4P23634 1241 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 KCNJ4P48050 445 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 C15orf52Q6ZUT6 534 aaKnown RBP9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 KBTBD3Q8NAB2 608 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 FSD1Q9BTV5 496 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 PIH1D3Q9NQM4 214 aaKnown RBP9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 ANKIB1Q9P2G1 1089 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 POLLQ9UGP5 575 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 GGA1Q9UJY5 639 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 CCDC88AQ3V6T2 1871 aa9.81□□□□□ -0.84
DEPDC4-207ENST00000549249 A0A0D9SFI3 127 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 A0A0G2JLW4 131 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 SGSM2O43147 1006 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 CYP2E1P05181 493 aaPredicted RBP9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 FKBP4Q02790 459 aaKnown RBP eCLIP9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 SLFNL1Q499Z3 407 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 SPATA5Q8NB90 893 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 TBC1D16Q8TBP0 767 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 FAM227BQ96M60 508 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 SCN9AQ15858 1988 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 FER1L6Q2WGJ9 1857 aa9.8□□□□□ -0.84
DEPDC4-207ENST00000549249 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 MED23Q9ULK4 1368 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 HIBADHP31937 336 aaKnown RBP9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 TBC1D32Q96NH3 1257 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 DIAPH3Q9NSV4 1193 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 PCDHGA4Q9Y5G9 962 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 PSME4Q14997 1843 aa9.79□□□□□ -0.84
DEPDC4-207ENST00000549249 HIP1O00291 1037 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 SLC34A2O95436 690 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 NUDT7P0C024 238 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 PBX2P40425 430 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 C1QTNF8P60827 252 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 TGFB2P61812 414 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 ZMYM1Q5SVZ6 1142 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 CWC27Q6UX04 472 aaKnown RBP9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 MPNDQ8N594 471 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 NLGN2Q8NFZ4 835 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 PDS5AQ29RF7 1337 aaKnown RBP9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 RAD50Q92878 1312 aa9.78□□□□□ -0.84
DEPDC4-207ENST00000549249 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 SEMA3EO15041 775 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 RNF113AO15541 343 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 ADD2P35612 726 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 TTF1Q15361 905 aaPredicted RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 DPP8Q6V1X1 898 aaPredicted RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF589Q86UQ0 364 aaPredicted RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 TTLL6Q8N841 843 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 TDRD7Q8NHU6 1098 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 SEC62Q99442 399 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 C22orf23Q9BZE7 217 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms