RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SLFNL1Q499Z3 407 aa34.66■■■■□ 3.14
BRF1-213ENST00000548421 SUGT1Q9Y2Z0 365 aa34.66■■■■□ 3.14
BRF1-213ENST00000548421 FKBP1AP62942 108 aaKnown RBP34.65■■■■□ 3.14
BRF1-213ENST00000548421 MCMDC2Q4G0Z9 681 aa34.65■■■■□ 3.14
BRF1-213ENST00000548421 DZIP1Q86YF9 867 aaKnown RBP34.65■■■■□ 3.14
BRF1-213ENST00000548421 NSUN4Q96CB9 384 aaKnown RBP34.65■■■■□ 3.14
BRF1-213ENST00000548421 IL25Q9H293 177 aa34.65■■■■□ 3.14
BRF1-213ENST00000548421 UTRNP46939 3433 aa34.65■■■■□ 3.14
BRF1-213ENST00000548421 MFAP1P55081 439 aaKnown RBP34.65■■■■□ 3.14
BRF1-213ENST00000548421 MECOMQ03112 1051 aa34.65■■■■□ 3.14
BRF1-213ENST00000548421 DACT2Q5SW24 774 aa34.65■■■■□ 3.14
BRF1-213ENST00000548421 REC8O95072 547 aa34.64■■■■□ 3.14
BRF1-213ENST00000548421 PRELPP51888 382 aa34.64■■■■□ 3.14
BRF1-213ENST00000548421 NAA16Q6N069 864 aaPredicted RBP34.64■■■■□ 3.14
BRF1-213ENST00000548421 SEC62Q99442 399 aaKnown RBP34.64■■■■□ 3.14
BRF1-213ENST00000548421 GRIK5Q16478 980 aa34.63■■■■□ 3.13
BRF1-213ENST00000548421 CERS5Q8N5B7 392 aa34.63■■■■□ 3.13
BRF1-213ENST00000548421 OSBP2Q969R2 916 aa34.63■■■■□ 3.13
BRF1-213ENST00000548421 MYH2Q9UKX2 1941 aa34.62■■■■□ 3.13
BRF1-213ENST00000548421 ZNF384Q8TF68 577 aa34.62■■■■□ 3.13
BRF1-213ENST00000548421 MAST3O60307 1309 aa34.62■■■■□ 3.13
BRF1-213ENST00000548421 LMNB1P20700 586 aa34.61■■■■□ 3.13
BRF1-213ENST00000548421 CYP7A1P22680 504 aa34.61■■■■□ 3.13
BRF1-213ENST00000548421 GSTO1P78417 241 aa34.6■■■■□ 3.13
BRF1-213ENST00000548421 GPR162Q16538 588 aa34.6■■■■□ 3.13
BRF1-213ENST00000548421 MXD3Q9BW11 206 aa34.6■■■■□ 3.13
BRF1-213ENST00000548421 PUS7LQ9H0K6 701 aaKnown RBP34.6■■■■□ 3.13
BRF1-213ENST00000548421 M0R2C6 588 aa34.59■■■■□ 3.13
BRF1-213ENST00000548421 RAD17O75943 681 aa34.59■■■■□ 3.13
BRF1-213ENST00000548421 ZNF589Q86UQ0 364 aaPredicted RBP34.59■■■■□ 3.13
BRF1-213ENST00000548421 UPF2Q9HAU5 1272 aaKnown RBP34.59■■■■□ 3.13
BRF1-213ENST00000548421 CCDC171Q6TFL3 1326 aa34.59■■■■□ 3.13
BRF1-213ENST00000548421 MYO3BQ8WXR4 1341 aa34.58■■■■□ 3.13
BRF1-213ENST00000548421 KIAA1211Q6ZU35 1233 aa34.58■■■■□ 3.13
BRF1-213ENST00000548421 ANO2Q9NQ90 1003 aa34.58■■■■□ 3.13
BRF1-213ENST00000548421 PSMD14O00487 310 aa34.57■■■■□ 3.12
BRF1-213ENST00000548421 CCDC129Q6ZRS4 1044 aa34.57■■■■□ 3.12
BRF1-213ENST00000548421 ADGRA1Q86SQ6 560 aa34.57■■■■□ 3.12
BRF1-213ENST00000548421 VIL1P09327 827 aaKnown RBP34.56■■■■□ 3.12
BRF1-213ENST00000548421 RSBN1LQ6PCB5 846 aaPredicted RBP34.56■■■■□ 3.12
BRF1-213ENST00000548421 SLF2Q8IX21 1173 aa34.56■■■■□ 3.12
BRF1-213ENST00000548421 TTF2Q9UNY4 1162 aaKnown RBP34.56■■■■□ 3.12
BRF1-213ENST00000548421 GPAA1O43292 621 aa34.55■■■■□ 3.12
BRF1-213ENST00000548421 CXCL9Q07325 125 aa34.55■■■■□ 3.12
BRF1-213ENST00000548421 AIDAQ96BJ3 306 aa34.55■■■■□ 3.12
BRF1-213ENST00000548421 TIAM2Q8IVF5 1701 aa34.55■■■■□ 3.12
BRF1-213ENST00000548421 FZD9O00144 591 aa34.54■■■■□ 3.12
BRF1-213ENST00000548421 GRIN3BO60391 1043 aa34.54■■■■□ 3.12
BRF1-213ENST00000548421 LDHCP07864 332 aa34.54■■■■□ 3.12
BRF1-213ENST00000548421 DIXDC1Q155Q3 683 aa34.54■■■■□ 3.12
BRF1-213ENST00000548421 CIAPIN1Q6FI81 312 aa34.54■■■■□ 3.12
BRF1-213ENST00000548421 F8W031 263 aaPredicted RBP34.53■■■■□ 3.12
BRF1-213ENST00000548421 TNIP1Q15025 636 aa34.53■■■■□ 3.12
BRF1-213ENST00000548421 LSG1Q9H089 658 aaKnown RBP34.53■■■■□ 3.12
BRF1-213ENST00000548421 MROH7-TTC4A0A0A0MT08 1334 aa34.53■■■■□ 3.12
BRF1-213ENST00000548421 EPB41L2O43491 1005 aaKnown RBP34.52■■■■□ 3.12
BRF1-213ENST00000548421 EIF6P56537 245 aaKnown RBP34.52■■■■□ 3.12
BRF1-213ENST00000548421 MIGA1Q8NAN2 632 aa34.52■■■■□ 3.12
BRF1-213ENST00000548421 MAGEB6P1A0A0J9YX57 407 aa34.52■■■■□ 3.12
BRF1-213ENST00000548421 MBD4O95243 580 aa34.52■■■■□ 3.12
BRF1-213ENST00000548421 KIAA0825Q8IV33 1275 aa34.52■■■■□ 3.12
BRF1-213ENST00000548421 USP26Q9BXU7 913 aa34.52■■■■□ 3.12
BRF1-213ENST00000548421 FAM163AQ96GL9 167 aaPredicted RBP34.51■■■■□ 3.11
BRF1-213ENST00000548421 RIOK1Q9BRS2 568 aaKnown RBP34.5■■■■□ 3.11
BRF1-213ENST00000548421 GAKO14976 1311 aa34.49■■■■□ 3.11
BRF1-213ENST00000548421 ADAMTSL1Q8N6G6 1762 aa34.49■■■■□ 3.11
BRF1-213ENST00000548421 AGBL3Q8NEM8 1001 aa34.49■■■■□ 3.11
BRF1-213ENST00000548421 STRBPQ96SI9 672 aaKnown RBP34.49■■■■□ 3.11
BRF1-213ENST00000548421 ARMT1Q9H993 441 aa34.49■■■■□ 3.11
BRF1-213ENST00000548421 PTH1RQ03431 593 aa34.48■■■■□ 3.11
BRF1-213ENST00000548421 LCORLQ8N3X6 602 aa34.48■■■■□ 3.11
BRF1-213ENST00000548421 GMLQ99445 158 aa34.48■■■■□ 3.11
BRF1-213ENST00000548421 NOL10Q9BSC4 688 aaKnown RBP34.48■■■■□ 3.11
BRF1-213ENST00000548421 AATFQ9NY61 560 aaKnown RBP eCLIP34.48■■■■□ 3.11
BRF1-213ENST00000548421 RNF181Q9P0P0 153 aa34.48■■■■□ 3.11
BRF1-213ENST00000548421 HDLBPQ00341 1268 aaKnown RBP34.47■■■■□ 3.11
BRF1-213ENST00000548421 TEKT1Q969V4 418 aa34.47■■■■□ 3.11
BRF1-213ENST00000548421 DSCC1Q9BVC3 393 aa34.47■■■■□ 3.11
BRF1-213ENST00000548421 MRIQ9BWK5 157 aa34.47■■■■□ 3.11
BRF1-213ENST00000548421 BAG3O95817 575 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 HSPD1P10809 573 aaKnown RBP34.46■■■■□ 3.11
BRF1-213ENST00000548421 SCNN1DP51172 638 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 HHIPL2Q6UWX4 724 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 ZBTB12Q9Y330 459 aaPredicted RBP34.46■■■■□ 3.11
BRF1-213ENST00000548421 GPR75-ASB3A0A0A6YYF3 556 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 GNAT2P19087 354 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 DYNLL1P63167 89 aaKnown RBP34.46■■■■□ 3.11
BRF1-213ENST00000548421 VPS53Q5VIR6 699 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 CERS3Q8IU89 383 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 MAP4K1Q92918 833 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 C22orf23Q9BZE7 217 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 DAGLAQ9Y4D2 1042 aa34.46■■■■□ 3.11
BRF1-213ENST00000548421 PPP4CP60510 307 aa34.45■■■■□ 3.1
BRF1-213ENST00000548421 SERPINA10Q9UK55 444 aa34.45■■■■□ 3.1
BRF1-213ENST00000548421 ZNF541Q9H0D2 1346 aa34.44■■■■□ 3.1
BRF1-213ENST00000548421 RPS12P25398 132 aaKnown RBP34.44■■■■□ 3.1
BRF1-213ENST00000548421 BTDP43251 543 aa34.44■■■■□ 3.1
BRF1-213ENST00000548421 CRKP46108 304 aa34.44■■■■□ 3.1
BRF1-213ENST00000548421 C9orf131Q5VYM1 1079 aa34.44■■■■□ 3.1
BRF1-213ENST00000548421 TBC1D32Q96NH3 1257 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms