RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 FAM84BQ96KN1 310 aaPredicted RBP25.32■■□□□ 1.64
GATC-202ENST00000548171 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.31■■□□□ 1.64
GATC-202ENST00000548171 SRCIN1Q9C0H9 1055 aa25.31■■□□□ 1.64
GATC-202ENST00000548171 MROH5Q6ZUA9 1318 aa25.31■■□□□ 1.64
GATC-202ENST00000548171 CRKP46108 304 aa25.3■■□□□ 1.64
GATC-202ENST00000548171 GTF2A2P52657 109 aa25.3■■□□□ 1.64
GATC-202ENST00000548171 SALL2Q9Y467 1007 aaPredicted RBP25.3■■□□□ 1.64
GATC-202ENST00000548171 MAP3K9P80192 1104 aa25.29■■□□□ 1.64
GATC-202ENST00000548171 HDLBPQ00341 1268 aaKnown RBP25.29■■□□□ 1.64
GATC-202ENST00000548171 SLC4A10Q6U841 1118 aa25.29■■□□□ 1.64
GATC-202ENST00000548171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.29■■□□□ 1.64
GATC-202ENST00000548171 CSADQ9Y600 493 aa25.29■■□□□ 1.64
GATC-202ENST00000548171 TCP10L2B9ZVM9 353 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 VGLL4Q14135 290 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 VPS37DQ86XT2 251 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 TBC1D22AQ8WUA7 517 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 PUS3Q9BZE2 481 aaKnown RBP25.28■■□□□ 1.64
GATC-202ENST00000548171 TMEM39BQ9GZU3 492 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 ZFYVE28Q9HCC9 887 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 RIPOR2Q9Y4F9 1068 aa25.28■■□□□ 1.64
GATC-202ENST00000548171 CCL15-CCL14A0A0B4J2E2 113 aa25.27■■□□□ 1.64
GATC-202ENST00000548171 WDHD1O75717 1129 aaPredicted RBP25.27■■□□□ 1.64
GATC-202ENST00000548171 TAF1CQ15572 869 aaPredicted RBP25.27■■□□□ 1.64
GATC-202ENST00000548171 CCL15Q16663 113 aa25.27■■□□□ 1.64
GATC-202ENST00000548171 CDAN1Q8IWY9 1227 aa25.27■■□□□ 1.64
GATC-202ENST00000548171 BRI3BPQ8WY22 251 aa25.27■■□□□ 1.64
GATC-202ENST00000548171 FBXO33Q7Z6M2 555 aa25.26■■□□□ 1.63
GATC-202ENST00000548171 KAZALD1Q96I82 304 aa25.26■■□□□ 1.63
GATC-202ENST00000548171 SUCLG2Q96I99 432 aa25.26■■□□□ 1.63
GATC-202ENST00000548171 TMEM106CQ9BVX2 250 aa25.26■■□□□ 1.63
GATC-202ENST00000548171 UTYO14607 1347 aa25.26■■□□□ 1.63
GATC-202ENST00000548171 CAVIN4Q5BKX8 364 aa25.25■■□□□ 1.63
GATC-202ENST00000548171 NBPF11Q86T75 865 aa25.25■■□□□ 1.63
GATC-202ENST00000548171 CNKSR2Q8WXI2 1034 aa25.25■■□□□ 1.63
GATC-202ENST00000548171 TEKT1Q969V4 418 aa25.25■■□□□ 1.63
GATC-202ENST00000548171 OTUD5Q96G74 571 aa25.25■■□□□ 1.63
GATC-202ENST00000548171 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
GATC-202ENST00000548171 MYH13Q9UKX3 1938 aa25.24■■□□□ 1.63
GATC-202ENST00000548171 HABP4Q5JVS0 413 aaKnown RBP25.24■■□□□ 1.63
GATC-202ENST00000548171 HOOK2Q96ED9 719 aa25.24■■□□□ 1.63
GATC-202ENST00000548171 ZNF333Q96JL9 665 aa25.24■■□□□ 1.63
GATC-202ENST00000548171 MRIQ9BWK5 157 aa25.24■■□□□ 1.63
GATC-202ENST00000548171 ZCCHC17Q9NP64 241 aaKnown RBP25.24■■□□□ 1.63
GATC-202ENST00000548171 SPDYE5A6NIY4 337 aa25.23■■□□□ 1.63
GATC-202ENST00000548171 FRAT2O75474 233 aaPredicted RBP25.23■■□□□ 1.63
GATC-202ENST00000548171 NBPF7P0C2Y1 421 aaPredicted RBP25.23■■□□□ 1.63
GATC-202ENST00000548171 EN2P19622 333 aaPredicted RBP25.23■■□□□ 1.63
GATC-202ENST00000548171 CAP1Q01518 475 aa25.23■■□□□ 1.63
GATC-202ENST00000548171 RABL6Q3YEC7 729 aaPredicted RBP25.23■■□□□ 1.63
GATC-202ENST00000548171 SLC9C1Q4G0N8 1177 aa25.23■■□□□ 1.63
GATC-202ENST00000548171 TMOD2Q9NZR1 351 aa25.23■■□□□ 1.63
GATC-202ENST00000548171 CENPFP49454 3210 aa25.23■■□□□ 1.63
GATC-202ENST00000548171 MAST3O60307 1309 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 CETPP11597 493 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 CHAF1AQ13111 956 aaPredicted RBP25.22■■□□□ 1.63
GATC-202ENST00000548171 FKBP1CQ5VVH2 108 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 FAM83AQ86UY5 434 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 ERO1BQ86YB8 467 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 FAM43AQ8N2R8 423 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 ZDHHC15Q96MV8 337 aa25.22■■□□□ 1.63
GATC-202ENST00000548171 GRIK5Q16478 980 aa25.21■■□□□ 1.63
GATC-202ENST00000548171 METTL24Q5JXM2 366 aa25.21■■□□□ 1.63
GATC-202ENST00000548171 BICC1Q9H694 974 aaKnown RBP25.21■■□□□ 1.63
GATC-202ENST00000548171 IQSEC3Q9UPP2 1182 aaPredicted RBP25.21■■□□□ 1.63
GATC-202ENST00000548171 SUGT1Q9Y2Z0 365 aa25.21■■□□□ 1.63
GATC-202ENST00000548171 PDE8BO95263 885 aa25.2■■□□□ 1.62
GATC-202ENST00000548171 PTCH2Q9Y6C5 1203 aa25.2■■□□□ 1.62
GATC-202ENST00000548171 MKI67P46013 3256 aaKnown RBP25.2■■□□□ 1.62
GATC-202ENST00000548171 RPAP1Q9BWH6 1393 aaPredicted RBP25.19■■□□□ 1.62
GATC-202ENST00000548171 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 ANP32CO43423 234 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 TLR2O60603 784 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 GNRH1P01148 92 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 KIF22Q14807 665 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 VGLL2Q8N8G2 317 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 SNCAIPQ9Y6H5 919 aa25.19■■□□□ 1.62
GATC-202ENST00000548171 SNAPC2Q13487 334 aa25.18■■□□□ 1.62
GATC-202ENST00000548171 WRNIP1Q96S55 665 aa25.18■■□□□ 1.62
GATC-202ENST00000548171 CACNB3P54284 484 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 LRRC24Q50LG9 513 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 DCAF15Q66K64 600 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 HHIPL2Q6UWX4 724 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 ANKRD44Q8N8A2 993 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 AK9Q5TCS8 1911 aa25.17■■□□□ 1.62
GATC-202ENST00000548171 ZSWIM8A7E2V4 1837 aa25.16■■□□□ 1.62
GATC-202ENST00000548171 LACTBP83111 547 aaPredicted RBP25.16■■□□□ 1.62
GATC-202ENST00000548171 PPIL2Q13356 520 aa25.16■■□□□ 1.62
GATC-202ENST00000548171 SLC4A8Q2Y0W8 1093 aa25.16■■□□□ 1.62
GATC-202ENST00000548171 APOBEC3HQ6NTF7 200 aaKnown RBP25.16■■□□□ 1.62
GATC-202ENST00000548171 BTBD19C9JJ37 291 aa25.15■■□□□ 1.62
GATC-202ENST00000548171 IRF6O14896 467 aa25.15■■□□□ 1.62
GATC-202ENST00000548171 PRMT2P55345 433 aa25.15■■□□□ 1.62
GATC-202ENST00000548171 PUM3Q15397 648 aaKnown RBP25.15■■□□□ 1.62
GATC-202ENST00000548171 ZKSCAN4Q969J2 545 aaPredicted RBP25.15■■□□□ 1.62
GATC-202ENST00000548171 IFIT1P09914 478 aaKnown RBP25.14■■□□□ 1.62
GATC-202ENST00000548171 BCAMP50895 628 aa25.14■■□□□ 1.62
GATC-202ENST00000548171 PPATQ06203 517 aa25.14■■□□□ 1.62
GATC-202ENST00000548171 CEP290O15078 2479 aa25.14■■□□□ 1.61
GATC-202ENST00000548171 PTPRCP08575 1304 aa25.13■■□□□ 1.61
GATC-202ENST00000548171 ZNF341Q9BYN7 854 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms