RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 PDE6AP16499 860 aa20.74■□□□□ 0.91
KRT4-201ENST00000548097 MAP3K12Q12852 859 aa20.74■□□□□ 0.91
KRT4-201ENST00000548097 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
KRT4-201ENST00000548097 FAM227BQ96M60 508 aa20.74■□□□□ 0.91
KRT4-201ENST00000548097 SEC62Q99442 399 aaKnown RBP20.74■□□□□ 0.91
KRT4-201ENST00000548097 PCDHAC2Q9Y5I4 1007 aa20.74■□□□□ 0.91
KRT4-201ENST00000548097 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
KRT4-201ENST00000548097 SPTY2D1Q68D10 685 aaPredicted RBP20.74■□□□□ 0.91
KRT4-201ENST00000548097 MYH7P12883 1935 aa20.73■□□□□ 0.91
KRT4-201ENST00000548097 ADD2P35612 726 aa20.73■□□□□ 0.91
KRT4-201ENST00000548097 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
KRT4-201ENST00000548097 GMLQ99445 158 aa20.73■□□□□ 0.91
KRT4-201ENST00000548097 IL25Q9H293 177 aa20.73■□□□□ 0.91
KRT4-201ENST00000548097 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
KRT4-201ENST00000548097 CYP7A1P22680 504 aa20.72■□□□□ 0.91
KRT4-201ENST00000548097 CHMLP26374 656 aa20.72■□□□□ 0.91
KRT4-201ENST00000548097 FKBP1AP62942 108 aaKnown RBP20.72■□□□□ 0.91
KRT4-201ENST00000548097 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
KRT4-201ENST00000548097 NAA16Q6N069 864 aaPredicted RBP20.72■□□□□ 0.91
KRT4-201ENST00000548097 CWC27Q6UX04 472 aaKnown RBP20.72■□□□□ 0.91
KRT4-201ENST00000548097 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
KRT4-201ENST00000548097 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
KRT4-201ENST00000548097 TCRBV5S4A2TA0A5A2 114 aa20.71■□□□□ 0.91
KRT4-201ENST00000548097 MIGA1Q8NAN2 632 aa20.71■□□□□ 0.91
KRT4-201ENST00000548097 GPC2Q8N158 579 aa20.71■□□□□ 0.91
KRT4-201ENST00000548097 PUS7LQ9H0K6 701 aaKnown RBP20.71■□□□□ 0.91
KRT4-201ENST00000548097 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
KRT4-201ENST00000548097 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
KRT4-201ENST00000548097 OSBP2Q969R2 916 aa20.7■□□□□ 0.9
KRT4-201ENST00000548097 MYH2Q9UKX2 1941 aa20.7■□□□□ 0.9
KRT4-201ENST00000548097 M0R2C6 588 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 CDC45O75419 566 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 AGBL3Q8NEM8 1001 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 MAST2Q6P0Q8 1798 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 USP17L8P0C7I0 530 aa20.69■□□□□ 0.9
KRT4-201ENST00000548097 RBM5P52756 815 aaKnown RBP eCLIP20.69■□□□□ 0.9
KRT4-201ENST00000548097 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
KRT4-201ENST00000548097 EGFRP00533 1210 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 CRKP46108 304 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 ZMYM1Q5SVZ6 1142 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 RBM26Q5T8P6 1007 aaKnown RBP20.68■□□□□ 0.9
KRT4-201ENST00000548097 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 AATFQ9NY61 560 aaKnown RBP eCLIP20.68■□□□□ 0.9
KRT4-201ENST00000548097 CNOT7Q9UIV1 285 aaKnown RBP20.68■□□□□ 0.9
KRT4-201ENST00000548097 SUGT1Q9Y2Z0 365 aa20.68■□□□□ 0.9
KRT4-201ENST00000548097 UBE3CQ15386 1083 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 DAGLAQ9Y4D2 1042 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 MROH7-TTC4A0A0A0MT08 1334 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 MAST3O60307 1309 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 ZFYP08048 801 aaPredicted RBP20.67■□□□□ 0.9
KRT4-201ENST00000548097 EPS15P42566 896 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
KRT4-201ENST00000548097 OGFOD1Q8N543 542 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 APPBP2Q92624 585 aa20.67■□□□□ 0.9
KRT4-201ENST00000548097 GLTPD2A6NH11 291 aa20.66■□□□□ 0.9
KRT4-201ENST00000548097 C8orf34Q49A92 452 aa20.66■□□□□ 0.9
KRT4-201ENST00000548097 TEKT1Q969V4 418 aa20.66■□□□□ 0.9
KRT4-201ENST00000548097 ARMT1Q9H993 441 aa20.66■□□□□ 0.9
KRT4-201ENST00000548097 RFX7Q2KHR2 1363 aa20.65■□□□□ 0.9
KRT4-201ENST00000548097 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
KRT4-201ENST00000548097 BTDP43251 543 aa20.65■□□□□ 0.9
KRT4-201ENST00000548097 LRRFIP1Q32MZ4 808 aaKnown RBP20.65■□□□□ 0.9
KRT4-201ENST00000548097 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
KRT4-201ENST00000548097 LCORLQ8N3X6 602 aa20.65■□□□□ 0.9
KRT4-201ENST00000548097 GPRC5DQ9NZD1 345 aa20.65■□□□□ 0.9
KRT4-201ENST00000548097 MBD4O95243 580 aa20.64■□□□□ 0.9
KRT4-201ENST00000548097 GSTO1P78417 241 aa20.64■□□□□ 0.9
KRT4-201ENST00000548097 DPF2Q92785 391 aa20.64■□□□□ 0.9
KRT4-201ENST00000548097 HDAC9Q9UKV0 1011 aa20.64■□□□□ 0.9
KRT4-201ENST00000548097 GAKO14976 1311 aa20.64■□□□□ 0.89
KRT4-201ENST00000548097 HIP1O00291 1037 aa20.64■□□□□ 0.89
KRT4-201ENST00000548097 MCMDC2Q4G0Z9 681 aa20.64■□□□□ 0.89
KRT4-201ENST00000548097 ZNF526Q8TF50 670 aaPredicted RBP20.64■□□□□ 0.89
KRT4-201ENST00000548097 PRMT6Q96LA8 375 aaPredicted RBP20.64■□□□□ 0.89
KRT4-201ENST00000548097 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
KRT4-201ENST00000548097 SERPINA10Q9UK55 444 aa20.64■□□□□ 0.89
KRT4-201ENST00000548097 ZC3H4Q9UPT8 1303 aaKnown RBP20.63■□□□□ 0.89
KRT4-201ENST00000548097 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 LDHCP07864 332 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 APOBEC3HQ6NTF7 200 aaKnown RBP20.63■□□□□ 0.89
KRT4-201ENST00000548097 HHIPL2Q6UWX4 724 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 RIOK1Q9BRS2 568 aaKnown RBP20.63■□□□□ 0.89
KRT4-201ENST00000548097 ESYT1Q9BSJ8 1104 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 HELLSQ9NRZ9 838 aa20.63■□□□□ 0.89
KRT4-201ENST00000548097 GPAA1O43292 621 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 PRKAB2O43741 272 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 SEC24BO95487 1268 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 CACNB3P54284 484 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 VPS53Q5VIR6 699 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 TRPM4Q8TD43 1214 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 SH3RF3Q8TEJ3 882 aaPredicted RBP20.62■□□□□ 0.89
KRT4-201ENST00000548097 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 SGSM2O43147 1006 aa20.62■□□□□ 0.89
KRT4-201ENST00000548097 ZNF280AP59817 542 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms